Protein–RNA interactions for Protein: P55036

PSMD4, 26S proteasome non-ATPase regulatory subunit 4, humanhuman

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD4P55036 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 MVK-217ENST00000639206 367 ntTSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 AC015688.4-201ENST00000580780 1647 ntBASIC13.67□□□□□ -0.22
PSMD4P55036 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.67□□□□□ -0.22
PSMD4P55036 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC13.67□□□□□ -0.22
PSMD4P55036 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.67□□□□□ -0.22
PSMD4P55036 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 AP001267.2-201ENST00000532619 2086 ntBASIC13.67□□□□□ -0.22
PSMD4P55036 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.67□□□□□ -0.22
PSMD4P55036 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
PSMD4P55036 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 YBX1P6-201ENST00000442962 1002 ntBASIC13.66□□□□□ -0.22
PSMD4P55036 CNN2P10-201ENST00000443067 918 ntBASIC13.66□□□□□ -0.22
PSMD4P55036 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC13.66□□□□□ -0.22
PSMD4P55036 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.66□□□□□ -0.22
PSMD4P55036 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.66□□□□□ -0.22
PSMD4P55036 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 AC239800.4-201ENST00000603712 296 ntBASIC13.66□□□□□ -0.22
PSMD4P55036 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.66□□□□□ -0.22
PSMD4P55036 MIR6805-201ENST00000615055 62 ntBASIC13.66□□□□□ -0.22
PSMD4P55036 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.66□□□□□ -0.22
PSMD4P55036 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
PSMD4P55036 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.66□□□□□ -0.22
PSMD4P55036 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.66□□□□□ -0.22
PSMD4P55036 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 ADCYAP1R1-207ENST00000614107 6575 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
PSMD4P55036 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
PSMD4P55036 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.65□□□□□ -0.22
PSMD4P55036 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 ARID3B-201ENST00000346246 4271 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
PSMD4P55036 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
PSMD4P55036 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 AC079776.1-201ENST00000401540 1152 ntBASIC13.65□□□□□ -0.22
PSMD4P55036 MIR1909-201ENST00000411312 80 ntBASIC13.65□□□□□ -0.22
PSMD4P55036 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.65□□□□□ -0.22
PSMD4P55036 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms