Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NUP98P52948 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP98P52948 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NUP98P52948 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC17.66■□□□□ 0.42
NUP98P52948 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 AC020910.6-201ENST00000623084 1459 ntBASIC17.66■□□□□ 0.42
NUP98P52948 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 TMEM182-201ENST00000409173 3198 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 BTNL8-203ENST00000400707 1512 ntTSL 2 BASIC17.66■□□□□ 0.42
NUP98P52948 LUC7L2-208ENST00000541170 1525 ntTSL 2 BASIC17.66■□□□□ 0.42
NUP98P52948 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NUP98P52948 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC17.66■□□□□ 0.42
NUP98P52948 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 TRBV7-3-201ENST00000390361 397 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
NUP98P52948 AC026470.1-201ENST00000478038 846 ntBASIC17.66■□□□□ 0.42
NUP98P52948 RN7SL582P-201ENST00000491078 279 ntBASIC17.66■□□□□ 0.42
NUP98P52948 AC113391.2-201ENST00000512245 553 ntTSL 4 BASIC17.66■□□□□ 0.42
NUP98P52948 DNM1P51-201ENST00000558149 522 ntBASIC17.66■□□□□ 0.42
NUP98P52948 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC17.66■□□□□ 0.42
NUP98P52948 ANKRD36C-208ENST00000619511 737 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC17.66■□□□□ 0.42
NUP98P52948 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC17.66■□□□□ 0.42
NUP98P52948 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NUP98P52948 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
NUP98P52948 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC17.66■□□□□ 0.42
NUP98P52948 ALG11-203ENST00000523764 1404 ntTSL 2 BASIC17.66■□□□□ 0.42
NUP98P52948 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 TMEM56-RWDD3-202ENST00000604534 1491 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
NUP98P52948 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 OXSM-201ENST00000280701 1519 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NUP98P52948 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
NUP98P52948 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 NIPA1-207ENST00000561183 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUP98P52948 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 SKA1-202ENST00000398452 979 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 OR2W2P-201ENST00000406313 909 ntBASIC17.65■□□□□ 0.42
NUP98P52948 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP98P52948 AC006372.2-201ENST00000433660 292 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP98P52948 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP98P52948 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP98P52948 LINC02171-201ENST00000508619 1033 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC17.65■□□□□ 0.42
NUP98P52948 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC17.65■□□□□ 0.42
NUP98P52948 AC005323.2-202ENST00000581304 493 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP98P52948 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 AC006483.2-201ENST00000609813 515 ntBASIC17.65■□□□□ 0.42
NUP98P52948 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 FAM168A-202ENST00000356467 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 AC022080.1-201ENST00000366255 781 ntBASIC17.65■□□□□ 0.42
NUP98P52948 RN7SL494P-201ENST00000461517 304 ntBASIC17.65■□□□□ 0.42
NUP98P52948 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 AREG-202ENST00000502307 956 ntTSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 AC090152.1-203ENST00000517898 1106 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.65■□□□□ 0.42
NUP98P52948 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 C12orf57-204ENST00000540506 551 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 AC132825.4-202ENST00000578792 434 ntBASIC17.65■□□□□ 0.42
NUP98P52948 MIR4265-201ENST00000582152 99 ntBASIC17.65■□□□□ 0.42
NUP98P52948 AC055811.3-201ENST00000584952 686 ntBASIC17.65■□□□□ 0.42
NUP98P52948 PSME2-201ENST00000216802 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.65■□□□□ 0.42
NUP98P52948 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 CDK3-201ENST00000425876 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
NUP98P52948 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUP98P52948 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
NUP98P52948 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms