Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 AC007952.4-201ENST00000573866 637 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 RN7SL470P-201ENST00000583069 259 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC006158.1-201ENST00000610661 249 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 AC138466.4-201ENST00000623965 852 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC139712.1-201ENST00000378256 1875 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 AP002353.1-201ENST00000528257 1599 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 RPH3AL-202ENST00000331302 2606 ntAPPRIS P2 TSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 RASGEF1A-204ENST00000395810 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 ALG1L13P-202ENST00000519320 584 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.62□□□□□ -0.39
HCFC1P51610 HERC2P11-201ENST00000562845 725 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 AC100756.2-201ENST00000569537 736 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 DBP-202ENST00000593500 712 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC12.62□□□□□ -0.39
HCFC1P51610 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC002044.2-201ENST00000624910 970 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 ARHGAP27P1-BPTFP1-KPNA2P3-201ENST00000578492 2732 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC12.62□□□□□ -0.39
HCFC1P51610 AL591122.2-201ENST00000624125 1853 ntBASIC12.62□□□□□ -0.39
HCFC1P51610 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC12.62□□□□□ -0.39
HCFC1P51610 CEP128-201ENST00000216517 1606 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
HCFC1P51610 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HCFC1P51610 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 SRCIN1-215ENST00000621492 4644 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.61□□□□□ -0.39
HCFC1P51610 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 FGD5P1-202ENST00000614866 2498 ntBASIC12.61□□□□□ -0.39
HCFC1P51610 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 AC092135.3-201ENST00000624151 1846 ntBASIC12.61□□□□□ -0.39
HCFC1P51610 SPEG-205ENST00000396698 3379 ntTSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
HCFC1P51610 LCE3B-201ENST00000335633 288 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
HCFC1P51610 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC12.61□□□□□ -0.39
HCFC1P51610 STK16-203ENST00000409516 895 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 ERP29P1-201ENST00000442902 706 ntBASIC12.61□□□□□ -0.39
HCFC1P51610 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC12.61□□□□□ -0.39
HCFC1P51610 PPOX-204ENST00000462866 473 ntTSL 5 BASIC12.61□□□□□ -0.39
HCFC1P51610 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC12.61□□□□□ -0.39
HCFC1P51610 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms