Protein–RNA interactions for Protein: P45973

CBX5, Chromobox protein homolog 5, humanhuman

Predictions only

Length 191 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5P45973 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC12.69□□□□□ -0.38
CBX5P45973 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CBX5P45973 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 MIR6074-201ENST00000612054 107 ntBASIC12.69□□□□□ -0.38
CBX5P45973 GPER1-207ENST00000619052 571 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 RAB34-224ENST00000636513 888 ntTSL 5 BASIC12.69□□□□□ -0.38
CBX5P45973 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 CSF1-201ENST00000329608 4210 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
CBX5P45973 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 MRVI1-216ENST00000547195 6155 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.69□□□□□ -0.38
CBX5P45973 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC12.69□□□□□ -0.38
CBX5P45973 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC12.69□□□□□ -0.38
CBX5P45973 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC12.69□□□□□ -0.38
CBX5P45973 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.69□□□□□ -0.38
CBX5P45973 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
CBX5P45973 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 ADCY7-201ENST00000254235 6138 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AC011840.2-201ENST00000563063 1520 ntBASIC12.68□□□□□ -0.38
CBX5P45973 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 API5-203ENST00000455725 2257 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 SMPDL3B-202ENST00000373894 1878 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 ZFP2-201ENST00000361362 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 ZNF148-206ENST00000485866 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 KIFC3-202ENST00000421376 3128 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 VDR-201ENST00000229022 4773 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 FLNA-204ENST00000369856 8241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CBX5P45973 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AC004945.1-201ENST00000416738 983 ntBASIC12.68□□□□□ -0.38
CBX5P45973 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CBX5P45973 RN7SL618P-201ENST00000477850 296 ntBASIC12.68□□□□□ -0.38
CBX5P45973 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC12.68□□□□□ -0.38
CBX5P45973 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC12.68□□□□□ -0.38
CBX5P45973 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC12.68□□□□□ -0.38
CBX5P45973 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AC120114.3-201ENST00000611923 658 ntBASIC12.68□□□□□ -0.38
CBX5P45973 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.68□□□□□ -0.38
CBX5P45973 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC12.68□□□□□ -0.38
CBX5P45973 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 CXCL5-201ENST00000296027 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
CBX5P45973 AC102953.2-201ENST00000609755 3026 ntBASIC12.68□□□□□ -0.38
CBX5P45973 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
CBX5P45973 HLCS-207ENST00000612277 6112 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 SRD5A1-201ENST00000274192 7132 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 ATG16L1-202ENST00000373525 2767 ntTSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 DDX31-202ENST00000372153 3285 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CBX5P45973 BCORL1-201ENST00000218147 6860 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
CBX5P45973 ADK-205ENST00000539909 1866 ntTSL 2 BASIC12.68□□□□□ -0.38
CBX5P45973 ARAP3-203ENST00000508305 4927 ntTSL 2 BASIC12.67□□□□□ -0.38
CBX5P45973 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CBX5P45973 CTNNB1-201ENST00000349496 3737 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CBX5P45973 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms