Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 RN7SKP175-201ENST00000408472 289 ntBASIC13.5□□□□□ -0.25
SLC1A3P43003 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC1A3P43003 FAM197Y7-201ENST00000432892 766 ntBASIC13.5□□□□□ -0.25
SLC1A3P43003 FAM8A4P-201ENST00000435433 1213 ntBASIC13.5□□□□□ -0.25
SLC1A3P43003 MYADML-201ENST00000474610 2147 ntBASIC13.5□□□□□ -0.25
SLC1A3P43003 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.5□□□□□ -0.25
SLC1A3P43003 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.5□□□□□ -0.25
SLC1A3P43003 AC106820.3-201ENST00000561653 397 ntBASIC13.5□□□□□ -0.25
SLC1A3P43003 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A3P43003 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC1A3P43003 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 AC006453.4-201ENST00000636949 1252 ntBASIC13.5□□□□□ -0.25
SLC1A3P43003 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SLC1A3P43003 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SLC1A3P43003 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
SLC1A3P43003 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
SLC1A3P43003 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.5□□□□□ -0.25
SLC1A3P43003 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC13.5□□□□□ -0.25
SLC1A3P43003 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A3P43003 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SLC1A3P43003 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 CALCOCO2-211ENST00000508679 1396 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 AC090505.1-201ENST00000430515 1834 ntBASIC13.49□□□□□ -0.25
SLC1A3P43003 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC13.49□□□□□ -0.25
SLC1A3P43003 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 AL590640.2-201ENST00000457038 527 ntBASIC13.49□□□□□ -0.25
SLC1A3P43003 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
SLC1A3P43003 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC1A3P43003 CDC23-208ENST00000505120 455 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC1A3P43003 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC1A3P43003 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.49□□□□□ -0.25
SLC1A3P43003 KRT90P-201ENST00000549264 1064 ntBASIC13.49□□□□□ -0.25
SLC1A3P43003 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.49□□□□□ -0.25
SLC1A3P43003 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 PFAS-212ENST00000625942 396 ntTSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
SLC1A3P43003 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 AC015688.4-201ENST00000580780 1647 ntBASIC13.49□□□□□ -0.25
SLC1A3P43003 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.49□□□□□ -0.25
SLC1A3P43003 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 KRT8P24-201ENST00000560290 1559 ntBASIC13.49□□□□□ -0.25
SLC1A3P43003 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SLC1A3P43003 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SLC1A3P43003 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SLC1A3P43003 HSD17B4-206ENST00000504811 2740 ntTSL 2 BASIC13.48□□□□□ -0.25
SLC1A3P43003 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.48□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms