Protein–RNA interactions for Protein: P29466

CASP1, Caspase-1, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1P29466 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASP1P29466 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CASP1P29466 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CASP1P29466 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC16.32■□□□□ 0.2
CASP1P29466 AOC1-201ENST00000360937 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CASP1P29466 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC16.32■□□□□ 0.2
CASP1P29466 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.32■□□□□ 0.2
CASP1P29466 AC112492.5-201ENST00000421897 457 ntBASIC16.32■□□□□ 0.2
CASP1P29466 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC16.32■□□□□ 0.2
CASP1P29466 OR10AC1-201ENST00000439431 2898 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CASP1P29466 CNN2P10-201ENST00000443067 918 ntBASIC16.32■□□□□ 0.2
CASP1P29466 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
CASP1P29466 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC16.32■□□□□ 0.2
CASP1P29466 CDC23-208ENST00000505120 455 ntTSL 3 BASIC16.32■□□□□ 0.2
CASP1P29466 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC16.32■□□□□ 0.2
CASP1P29466 AC068228.2-201ENST00000522383 777 ntTSL 3 BASIC16.32■□□□□ 0.2
CASP1P29466 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CASP1P29466 MIR4783-201ENST00000580343 82 ntBASIC16.32■□□□□ 0.2
CASP1P29466 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC16.32■□□□□ 0.2
CASP1P29466 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CASP1P29466 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 AC012645.4-201ENST00000610691 1061 ntBASIC16.32■□□□□ 0.2
CASP1P29466 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CASP1P29466 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 AL136301.1-201ENST00000615830 422 ntBASIC16.32■□□□□ 0.2
CASP1P29466 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 HOXA3-207ENST00000612286 3396 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CASP1P29466 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CASP1P29466 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
CASP1P29466 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 CNPY1-203ENST00000636372 2259 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 CLN8-204ENST00000519254 1769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 OR2I1P-209ENST00000641730 5365 ntBASIC16.31■□□□□ 0.2
CASP1P29466 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 AHCYP2-201ENST00000430630 1300 ntBASIC16.31■□□□□ 0.2
CASP1P29466 THOC6-207ENST00000574549 1300 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 PFDN5-202ENST00000334478 586 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 MUC1-202ENST00000338684 1107 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 AL136309.1-201ENST00000403917 691 ntBASIC16.31■□□□□ 0.2
CASP1P29466 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 MDM2-215ENST00000428863 1037 ntTSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 RPL7P3-201ENST00000441388 714 ntBASIC16.31■□□□□ 0.2
CASP1P29466 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC16.31■□□□□ 0.2
CASP1P29466 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC16.31■□□□□ 0.2
CASP1P29466 AP000812.2-201ENST00000538934 718 ntBASIC16.31■□□□□ 0.2
CASP1P29466 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.31■□□□□ 0.2
CASP1P29466 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 AC027601.3-201ENST00000622907 509 ntBASIC16.31■□□□□ 0.2
CASP1P29466 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 FAM90A12P-201ENST00000519497 2375 ntBASIC16.31■□□□□ 0.2
CASP1P29466 FAM90A24P-201ENST00000520792 2369 ntBASIC16.31■□□□□ 0.2
CASP1P29466 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 AC023794.5-201ENST00000564380 2157 ntBASIC16.31■□□□□ 0.2
CASP1P29466 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 ALAD-201ENST00000409155 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC16.31■□□□□ 0.2
CASP1P29466 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC16.31■□□□□ 0.2
CASP1P29466 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CASP1P29466 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
CASP1P29466 TCAM1P-207ENST00000485295 1537 ntBASIC16.3■□□□□ 0.2
CASP1P29466 TMBIM7P-202ENST00000641474 1516 ntBASIC16.3■□□□□ 0.2
CASP1P29466 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC16.3■□□□□ 0.2
CASP1P29466 AC005014.1-201ENST00000432006 2976 ntBASIC16.3■□□□□ 0.2
CASP1P29466 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
CASP1P29466 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms