Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 AGAP10P-201ENST00000454844 2418 ntBASIC13.89□□□□□ -0.19
PTPN6P29350 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
PTPN6P29350 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
PTPN6P29350 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
PTPN6P29350 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 AL138709.1-201ENST00000614840 1693 ntBASIC13.88□□□□□ -0.19
PTPN6P29350 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 AC111170.3-201ENST00000624282 2464 ntBASIC13.88□□□□□ -0.19
PTPN6P29350 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 SAMD4B-201ENST00000314471 4519 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.88□□□□□ -0.19
PTPN6P29350 TMUB2-211ENST00000589184 1837 ntTSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 PLK2-201ENST00000274289 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 ATXN2L-202ENST00000336783 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 ELN-210ENST00000380584 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 ANKRD19P-201ENST00000338192 862 ntBASIC13.88□□□□□ -0.19
PTPN6P29350 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.88□□□□□ -0.19
PTPN6P29350 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 AC025279.2-201ENST00000569730 653 ntBASIC13.88□□□□□ -0.19
PTPN6P29350 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 MIR6775-201ENST00000617557 69 ntBASIC13.88□□□□□ -0.19
PTPN6P29350 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 AC079781.5-202ENST00000641784 3743 ntBASIC13.88□□□□□ -0.19
PTPN6P29350 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 LONP1-202ENST00000540670 3002 ntTSL 2 BASIC13.88□□□□□ -0.19
PTPN6P29350 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
PTPN6P29350 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC13.88□□□□□ -0.19
PTPN6P29350 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 C8orf49-201ENST00000525043 1968 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 HLA-DQB1-205ENST00000434651 1642 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
PTPN6P29350 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 FAM90A12P-201ENST00000519497 2375 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 FAM90A24P-201ENST00000520792 2369 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 PATL2-208ENST00000560780 1863 ntAPPRIS ALT2 TSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 ZBTB12BP-201ENST00000314232 1122 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 MIR658-201ENST00000385210 100 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
PTPN6P29350 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 C2orf27AP3-201ENST00000434123 579 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
PTPN6P29350 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
PTPN6P29350 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 KLF2P4-201ENST00000451959 1225 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 CTBP2P5-201ENST00000454986 1264 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.87□□□□□ -0.19
PTPN6P29350 AC119751.2-201ENST00000504529 210 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 AC104989.1-201ENST00000519711 778 ntBASIC13.87□□□□□ -0.19
PTPN6P29350 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms