Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 CEP95-212ENST00000581056 903 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.56
RXRBP28702 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC18.52■□□□□ 0.56
RXRBP28702 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC18.52■□□□□ 0.56
RXRBP28702 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
RXRBP28702 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
RXRBP28702 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC18.52■□□□□ 0.56
RXRBP28702 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.52■□□□□ 0.56
RXRBP28702 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.52■□□□□ 0.55
RXRBP28702 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC18.52■□□□□ 0.55
RXRBP28702 ZC3H8-201ENST00000272570 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RXRBP28702 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC18.52■□□□□ 0.55
RXRBP28702 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
RXRBP28702 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
RXRBP28702 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
RXRBP28702 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RXRBP28702 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
RXRBP28702 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RXRBP28702 C6orf48-202ENST00000375635 610 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
RXRBP28702 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RXRBP28702 C6orf48-209ENST00000395789 952 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
RXRBP28702 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 SLC2A11-208ENST00000405847 730 ntTSL 2 BASIC18.51■□□□□ 0.55
RXRBP28702 ZNF32-AS2-201ENST00000418966 905 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 RBM14-205ENST00000443702 732 ntTSL 3 BASIC18.51■□□□□ 0.55
RXRBP28702 CHCHD2P6-201ENST00000454346 447 ntBASIC18.51■□□□□ 0.55
RXRBP28702 RN7SL487P-201ENST00000468140 344 ntBASIC18.51■□□□□ 0.55
RXRBP28702 AC114939.1-201ENST00000520980 514 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.51■□□□□ 0.55
RXRBP28702 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18.51■□□□□ 0.55
RXRBP28702 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.51■□□□□ 0.55
RXRBP28702 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 KRT8P43-201ENST00000406052 1458 ntBASIC18.51■□□□□ 0.55
RXRBP28702 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
RXRBP28702 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 TTN-AS1-264ENST00000627564 1319 ntTSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 PHKG1-201ENST00000297373 1431 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 CROCCP1-201ENST00000426910 5675 ntBASIC18.5■□□□□ 0.55
RXRBP28702 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 RPS6-201ENST00000315377 863 ntTSL 3 BASIC18.5■□□□□ 0.55
RXRBP28702 RNA5SP491-201ENST00000362936 118 ntBASIC18.5■□□□□ 0.55
RXRBP28702 NR0B1-201ENST00000378963 475 ntTSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC18.5■□□□□ 0.55
RXRBP28702 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC18.5■□□□□ 0.55
RXRBP28702 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 AACSP1-202ENST00000521412 1095 ntBASIC18.5■□□□□ 0.55
RXRBP28702 RPL10P8-201ENST00000522888 313 ntBASIC18.5■□□□□ 0.55
RXRBP28702 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC18.5■□□□□ 0.55
RXRBP28702 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC18.5■□□□□ 0.55
RXRBP28702 MIR5091-201ENST00000578707 93 ntBASIC18.5■□□□□ 0.55
RXRBP28702 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC18.5■□□□□ 0.55
RXRBP28702 C12orf45-205ENST00000622317 1078 ntTSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 AL807742.1-201ENST00000636678 1160 ntTSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 GAPDHS-201ENST00000222286 1489 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
RXRBP28702 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
RXRBP28702 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC18.5■□□□□ 0.55
RXRBP28702 GNAI2-201ENST00000266027 2169 ntTSL 2 BASIC18.49■□□□□ 0.55
RXRBP28702 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 SLC25A31-201ENST00000281154 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
RXRBP28702 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms