Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AL136301.1-201ENST00000615830 422 ntBASIC13.13□□□□□ -0.31
HLA-DOBP13765 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 AC126335.2-201ENST00000623362 4637 ntBASIC13.13□□□□□ -0.31
HLA-DOBP13765 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 SOAT1-203ENST00000539888 6794 ntTSL 2 BASIC13.13□□□□□ -0.31
HLA-DOBP13765 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
HLA-DOBP13765 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC016397.2-201ENST00000624848 1985 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AL355994.2-201ENST00000447882 704 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 HOMER2P2-201ENST00000451621 847 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC104989.1-201ENST00000519711 778 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 SORD2P-201ENST00000558556 1069 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 MIR6074-201ENST00000612054 107 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 HSPA8P5-201ENST00000456928 2069 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC041040.2-201ENST00000622926 2899 ntBASIC13.12□□□□□ -0.31
HLA-DOBP13765 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 PIGG-202ENST00000383028 2787 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 DUSP18-204ENST00000403268 2920 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
HLA-DOBP13765 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
HLA-DOBP13765 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 GRK6P1-201ENST00000400595 1711 ntBASIC13.11□□□□□ -0.31
HLA-DOBP13765 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
HLA-DOBP13765 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 MPP2-214ENST00000523501 2121 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC13.11□□□□□ -0.31
HLA-DOBP13765 AC023310.1-201ENST00000554836 735 ntBASIC13.11□□□□□ -0.31
HLA-DOBP13765 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms