Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 AC021305.1-201ENST00000520656 1514 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 LAP3P2-201ENST00000454686 1454 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 LINC00470-210ENST00000584090 1334 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 MAEL-202ENST00000367872 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 NHP2-202ENST00000314397 599 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC6P09630 PYY2-201ENST00000315776 282 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 SLC50A1-202ENST00000368401 1166 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXC6P09630 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 AC156455.1-203ENST00000423999 893 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC6P09630 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC6P09630 AL135901.1-201ENST00000451812 333 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC6P09630 RN7SL23P-201ENST00000484055 275 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.3■□□□□ 0.2
HOXC6P09630 AC105390.1-201ENST00000511330 560 ntTSL 4 BASIC16.3■□□□□ 0.2
HOXC6P09630 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC6P09630 LINC01154-201ENST00000548617 454 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC6P09630 NDUFB10P1-201ENST00000567319 521 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.3■□□□□ 0.2
HOXC6P09630 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC16.3■□□□□ 0.2
HOXC6P09630 AC011247.3-201ENST00000603297 438 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 RPL13A-213ENST00000621674 1098 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXC6P09630 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.3■□□□□ 0.2
HOXC6P09630 AJ011931.1-201ENST00000618749 2492 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
HOXC6P09630 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
HOXC6P09630 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
HOXC6P09630 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 AGGF1P1-201ENST00000509500 2073 ntBASIC16.3■□□□□ 0.2
HOXC6P09630 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
HOXC6P09630 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 PPP1R2P4-201ENST00000424051 595 ntBASIC16.29■□□□□ 0.2
HOXC6P09630 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC16.29■□□□□ 0.2
HOXC6P09630 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 AC093909.3-201ENST00000504783 336 ntBASIC16.29■□□□□ 0.2
HOXC6P09630 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 AC011471.3-201ENST00000623576 402 ntBASIC16.29■□□□□ 0.2
HOXC6P09630 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 LONRF1-201ENST00000398246 3594 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
HOXC6P09630 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC16.29■□□□□ 0.2
HOXC6P09630 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
HOXC6P09630 AC025183.3-201ENST00000623526 1482 ntBASIC16.29■□□□□ 0.2
HOXC6P09630 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
HOXC6P09630 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
HOXC6P09630 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 MBD1-225ENST00000591535 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 SAT1-201ENST00000379251 801 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 SAT1-202ENST00000379253 909 ntTSL 2 BASIC16.28■□□□□ 0.2
HOXC6P09630 SAT1-203ENST00000379254 868 ntTSL 3 BASIC16.28■□□□□ 0.2
HOXC6P09630 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
HOXC6P09630 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXC6P09630 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
HOXC6P09630 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.28■□□□□ 0.2
HOXC6P09630 RGS5-216ENST00000449680 788 ntTSL 3 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 86 ms