Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC3O60481 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
ZIC3O60481 ACTG1P2-201ENST00000415776 1125 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 BCYRN1-201ENST00000418539 200 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 ACTG1P11-201ENST00000425411 1125 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 RNF144A-AS1-203ENST00000426122 579 ntTSL 4 BASIC13.09□□□□□ -0.31
ZIC3O60481 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC3O60481 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 HHIP-AS1-201ENST00000503066 897 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC13.09□□□□□ -0.31
ZIC3O60481 RERG-205ENST00000537647 935 ntTSL 2 BASIC13.09□□□□□ -0.31
ZIC3O60481 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.09□□□□□ -0.31
ZIC3O60481 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC13.09□□□□□ -0.31
ZIC3O60481 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ZIC3O60481 AC021016.3-201ENST00000608367 477 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 AL591471.1-201ENST00000621855 229 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 AC090386.2-201ENST00000623010 1039 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 NAP1L6-202ENST00000641404 1222 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 MYO15B-237ENST00000642007 4893 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 AC139749.1-202ENST00000617529 3139 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 AC099063.4-201ENST00000641099 1602 ntBASIC13.09□□□□□ -0.31
ZIC3O60481 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
ZIC3O60481 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
ZIC3O60481 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
ZIC3O60481 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
ZIC3O60481 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
ZIC3O60481 AC012617.1-204ENST00000586340 2305 ntBASIC13.08□□□□□ -0.31
ZIC3O60481 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.08□□□□□ -0.31
ZIC3O60481 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.31
ZIC3O60481 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC13.08□□□□□ -0.31
ZIC3O60481 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC13.08□□□□□ -0.31
ZIC3O60481 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 SCAP-206ENST00000428413 3749 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 AC082651.3-201ENST00000474667 1947 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 UQCRQ-203ENST00000378670 839 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.08□□□□□ -0.32
ZIC3O60481 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC13.08□□□□□ -0.32
ZIC3O60481 TSACC-208ENST00000481479 741 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZIC3O60481 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 TCL1A-208ENST00000556450 872 ntAPPRIS P1 TSL 3 BASIC13.08□□□□□ -0.32
ZIC3O60481 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 IGHV3OR16-16-201ENST00000563644 343 ntBASIC13.08□□□□□ -0.32
ZIC3O60481 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC13.08□□□□□ -0.32
ZIC3O60481 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 LAP3P2-201ENST00000454686 1454 ntBASIC13.08□□□□□ -0.32
ZIC3O60481 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 STK26-204ENST00000481105 1835 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC13.08□□□□□ -0.32
ZIC3O60481 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 TLE3-203ENST00000451782 2356 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
ZIC3O60481 DDB1-201ENST00000301764 4506 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
ZIC3O60481 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms