Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 AC010141.1-201ENST00000411585 623 ntBASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 TCEAL4-208ENST00000472484 1273 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 RN7SL774P-201ENST00000577467 290 ntBASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 AC026740.1-201ENST00000607068 791 ntBASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 AC090164.2-201ENST00000611487 516 ntBASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 OSTF1-201ENST00000346234 1319 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 CHIA-206ENST00000430615 1320 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 EXTL1-201ENST00000374280 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 MYO16-202ENST00000356711 6874 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
NPIPA3F8WFD2 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 KAAG1-201ENST00000274766 1382 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 WASHC2C-201ENST00000336378 4669 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 GDPGP1-202ENST00000558017 5323 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 MTHFR-210ENST00000641407 2387 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 MAX-201ENST00000246163 897 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 RPL18P13-201ENST00000478088 569 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 RNA5SP423-201ENST00000517127 109 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 MIR3619-201ENST00000579667 83 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AC005324.6-201ENST00000587972 613 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AL645939.5-201ENST00000606834 243 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AL805961.1-203ENST00000641078 1258 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AC068587.8-201ENST00000641239 219 ntBASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 ACOX1-201ENST00000293217 7514 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 AFF3-202ENST00000409236 9849 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 SEC13-208ENST00000397109 1467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC13.34□□□□□ -0.27
NPIPA3F8WFD2 FSD1L-206ENST00000481272 1804 ntTSL 2 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 76.2 ms