Protein–RNA interactions for Protein: D6RIA3

LOC285556, Uncharacterized protein, humanhuman

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC285556D6RIA3 AP1M2-201ENST00000250244 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
LOC285556D6RIA3 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LOC285556D6RIA3 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC16.16■□□□□ 0.18
LOC285556D6RIA3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LOC285556D6RIA3 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
LOC285556D6RIA3 SPAAR-203ENST00000636776 1538 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 GALP-201ENST00000357330 938 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AC005722.1-201ENST00000431878 964 ntBASIC16.15■□□□□ 0.18
LOC285556D6RIA3 GALP-202ENST00000440823 889 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 GULOP-201ENST00000454030 748 ntBASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SIX3-AS1-202ENST00000456467 557 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 GGNBP1-204ENST00000613113 887 ntBASIC16.15■□□□□ 0.18
LOC285556D6RIA3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 IKBIP-201ENST00000299157 3189 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 DHRS7-209ENST00000557185 1322 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AP000354.1-201ENST00000396982 456 ntBASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AF274858.1-201ENST00000406288 372 ntBASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AC108471.2-201ENST00000533736 1061 ntTSL 3 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 MBP-238ENST00000580402 915 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 ZFP36-201ENST00000594045 690 ntTSL 3 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 RPL18A-203ENST00000599870 1084 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AC008982.2-201ENST00000600473 493 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 AP001527.2-201ENST00000614441 631 ntBASIC16.15■□□□□ 0.18
LOC285556D6RIA3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC16.15■□□□□ 0.18
LOC285556D6RIA3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC16.14■□□□□ 0.18
LOC285556D6RIA3 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC16.14■□□□□ 0.18
LOC285556D6RIA3 C14orf180-203ENST00000557649 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 RNA5SP491-201ENST00000362936 118 ntBASIC16.14■□□□□ 0.17
LOC285556D6RIA3 HCRTR1-201ENST00000373705 1170 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 KLK11-203ENST00000391804 930 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 HLA-DMA-202ENST00000395303 1007 ntBASIC16.14■□□□□ 0.17
LOC285556D6RIA3 ASS1P2-201ENST00000439895 1223 ntBASIC16.14■□□□□ 0.17
LOC285556D6RIA3 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 Metazoa_SRP.83-201ENST00000611762 320 ntBASIC16.14■□□□□ 0.17
LOC285556D6RIA3 Metazoa_SRP.37-201ENST00000617743 320 ntBASIC16.14■□□□□ 0.17
LOC285556D6RIA3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
LOC285556D6RIA3 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
LOC285556D6RIA3 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.13■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 45.2 ms