Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 LLGL1-201ENST00000316843 4260 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 AC138969.2-201ENST00000532739 9932 ntBASIC11.79□□□□□ -0.52
SRRM4A7MD48 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ARSEP1-201ENST00000420443 635 ntBASIC11.79□□□□□ -0.52
SRRM4A7MD48 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 AC099548.2-204ENST00000481651 2106 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 CDC23-208ENST00000505120 455 ntTSL 3 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 RPL8-205ENST00000527914 551 ntTSL 3 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 AC073413.1-201ENST00000603927 732 ntBASIC11.79□□□□□ -0.52
SRRM4A7MD48 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 CCNG1-202ENST00000393929 2366 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 RPP14-202ENST00000445193 7985 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
SRRM4A7MD48 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 CU639417.3-201ENST00000624240 1404 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 CELF1-214ENST00000531165 3650 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 SLC25A35-201ENST00000380067 2785 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AL354989.2-201ENST00000435838 1540 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 AC006001.1-201ENST00000325130 474 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 CALY-203ENST00000368558 825 ntTSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 COX5BP1-201ENST00000507622 393 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
SRRM4A7MD48 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 AL358472.3-201ENST00000608147 415 ntBASIC11.78□□□□□ -0.52
SRRM4A7MD48 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC11.78□□□□□ -0.52
SRRM4A7MD48 LARP4-220ENST00000615080 856 ntTSL 5 BASIC11.78□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms