Protein–RNA interactions for Protein: A0A1W2PRF3

Uncharacterized protein, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
A0A1W2PRF3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 AC126335.2-201ENST00000623362 4637 ntBASIC12.11□□□□□ -0.47
A0A1W2PRF3 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 ADAMTS7P1-201ENST00000613213 4793 ntBASIC12.11□□□□□ -0.47
A0A1W2PRF3 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 ADAMTS10-201ENST00000270328 4194 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
A0A1W2PRF3 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
A0A1W2PRF3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 KRTAP21-2-201ENST00000333892 440 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 PPP1R14B-202ENST00000392210 600 ntTSL 3 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 KRTAP10-13P-201ENST00000412914 571 ntBASIC12.1□□□□□ -0.47
A0A1W2PRF3 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 AL591846.1-201ENST00000451736 433 ntBASIC12.1□□□□□ -0.47
A0A1W2PRF3 NCK2-206ENST00000522586 490 ntTSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TAMM41-205ENST00000444133 1619 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 LINC01101-201ENST00000622953 1884 ntBASIC12.1□□□□□ -0.47
A0A1W2PRF3 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.1□□□□□ -0.47
A0A1W2PRF3 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 MTHFR-210ENST00000641407 2387 ntBASIC12.1□□□□□ -0.47
A0A1W2PRF3 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
A0A1W2PRF3 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
A0A1W2PRF3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
A0A1W2PRF3 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
A0A1W2PRF3 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
A0A1W2PRF3 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
A0A1W2PRF3 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 KDM5C-208ENST00000452825 6096 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
A0A1W2PRF3 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms