Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 C4orf33-201ENST00000281146 6170 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 PRPF38A-201ENST00000257181 5274 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 PGBD1-201ENST00000259883 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 MYH3-205ENST00000583535 6037 ntAPPRIS P1 TSL 5 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 APOBR-202ENST00000564831 3792 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 INTS3-204ENST00000435409 3597 ntAPPRIS P1 TSL 2 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 ZNF41-202ENST00000377065 4531 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 AKNA-201ENST00000223791 4414 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 INTS13-201ENST00000261191 2974 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 BX255923.2-202ENST00000620833 2874 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 NLRP2-202ENST00000339757 3422 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 AC018445.4-201ENST00000624066 2291 ntBASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 PTPN6-202ENST00000399448 2159 ntAPPRIS P3 TSL 1 (best) BASIC11.09□□□□□ -0.63
TRAPPC1Q9Y5R8 PI4KAP2-201ENST00000360806 2080 ntBASIC11.08□□□□□ -0.63
TRAPPC1Q9Y5R8 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.08□□□□□ -0.63
TRAPPC1Q9Y5R8 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SLC1A2-208ENST00000606205 1890 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ANXA11-201ENST00000265447 2526 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 PLEC-208ENST00000436759 14787 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 PCSK2-202ENST00000377899 4674 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ZBED2-201ENST00000317012 2311 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 RBM33-205ENST00000392759 1580 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 LAMA4-207ENST00000424408 5983 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 CPN2-201ENST00000323830 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SUPV3L1-201ENST00000359655 2484 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 IP6K1-202ENST00000395238 4117 ntTSL 3 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 VENTX-201ENST00000325980 2911 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 CIPC-205ENST00000555437 566 ntTSL 3 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 AC015910.1-201ENST00000579400 975 ntBASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 AC025181.2-201ENST00000606994 802 ntBASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 MARK2P9-201ENST00000430958 1727 ntBASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 IGHG1-202ENST00000390548 2619 ntAPPRIS P5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TCF3-220ENST00000611869 4409 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 POU2F2-204ENST00000526816 3218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 OR6F1-204ENST00000641470 1762 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 DCAF16-201ENST00000382247 4548 ntAPPRIS P1 TSL 2 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SLC12A6-205ENST00000458406 4425 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 TMEM164-204ENST00000372073 5567 ntAPPRIS P3 TSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 DLL1-201ENST00000366756 3174 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 SLC37A4-202ENST00000357590 2356 ntTSL 5 BASIC11.08□□□□□ -0.64
TRAPPC1Q9Y5R8 COL6A2-204ENST00000409416 3430 ntTSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 TNFRSF8-201ENST00000263932 3686 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 NAV1-203ENST00000367302 9685 ntTSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CDK5RAP1-203ENST00000357886 2164 ntTSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 SSX2IP-201ENST00000342203 5835 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
TRAPPC1Q9Y5R8 IGSF11-209ENST00000491903 1487 ntTSL 2 BASIC11.07□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms