Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SBF1P1-201ENST00000444527 5631 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MIR769-201ENST00000390225 118 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 CAMKMT-203ENST00000403853 1114 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 NDUFAB1P1-201ENST00000404262 460 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC083949.1-201ENST00000422013 657 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 PTPA-217ENST00000434095 870 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SERPINA13P-202ENST00000478994 924 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC005730.2-201ENST00000564549 1184 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC009088.2-201ENST00000564743 463 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 RN7SL713P-201ENST00000582127 302 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MVK-217ENST00000639206 367 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AL365209.1-201ENST00000624418 6473 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 ITGAV-201ENST00000261023 7030 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 ABR-205ENST00000544583 5595 ntTSL 2 BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AC009093.2-202ENST00000620513 2079 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 AL590440.2-201ENST00000641973 1595 ntBASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
PCDHB1Q9Y5F3 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 KHSRPP1-201ENST00000427983 1768 ntBASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AL136309.1-201ENST00000403917 691 ntBASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AP003171.2-201ENST00000528208 925 ntBASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 KLK11-210ENST00000600362 759 ntTSL 3 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 PLEKHB2-211ENST00000628582 1297 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 AC090505.1-201ENST00000430515 1834 ntBASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 TMED5-202ENST00000370282 6104 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 USP28-214ENST00000545540 3431 ntTSL 2 BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
PCDHB1Q9Y5F3 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 HSPA7-201ENST00000445535 1927 ntBASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 CYTH3-201ENST00000350796 4505 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 CYTH3-202ENST00000396741 4508 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
PCDHB1Q9Y5F3 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.62□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms