Protein–RNA interactions for Protein: Q9Y2W7

KCNIP3, Calsenilin, humanhuman

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP3Q9Y2W7 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PRAME-214ENST00000543184 2758 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SGMS1-203ENST00000429490 3634 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SYBU-204ENST00000408908 2983 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 SMU1-201ENST00000397149 7122 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 WNK1-202ENST00000340908 11208 ntTSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 ZNF501-205ENST00000620116 3382 ntAPPRIS P1 TSL 4 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 AC090643.2-201ENST00000623442 2029 ntBASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.32□□□□□ -0.44
KCNIP3Q9Y2W7 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 RERG-209ENST00000546331 1383 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 NCAPG-201ENST00000251496 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 MYO7A-205ENST00000458637 7336 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 GPR161-209ENST00000539777 7655 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 GDPD5-201ENST00000336898 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 CICP16-201ENST00000502609 2813 ntBASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC111170.3-201ENST00000624282 2464 ntBASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 JADE1-209ENST00000511647 3560 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 CCND1-203ENST00000536559 553 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 MIR6080-201ENST00000617359 66 ntBASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 GMIP-201ENST00000203556 3538 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC011481.3-201ENST00000623895 5594 ntBASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 TUBB3P1-201ENST00000405796 1332 ntBASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 AC093525.8-201ENST00000624099 1342 ntBASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 PDE12-201ENST00000311180 8773 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ARHGAP10-201ENST00000336498 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 FIBCD1-202ENST00000372338 3253 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 TRPM2-203ENST00000397928 6221 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC12.31□□□□□ -0.44
KCNIP3Q9Y2W7 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 SCAMP5-202ENST00000425597 3411 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ZNF654-204ENST00000636215 6446 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 FAM155A-201ENST00000375915 8503 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 MRVI1-202ENST00000424001 5815 ntTSL 5 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC12.3□□□□□ -0.44
KCNIP3Q9Y2W7 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.3□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms