Protein–RNA interactions for Protein: Q9Y2H6

FNDC3A, Fibronectin type-III domain-containing protein 3A, humanhuman

Known RBP Predictions only

Length 1,198 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3AQ9Y2H6 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 B9D1-203ENST00000395615 805 ntTSL 3 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 TISP43-201ENST00000409793 538 ntTSL 4 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 TSACC-208ENST00000481479 741 ntTSL 2 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
FNDC3AQ9Y2H6 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 PTBP1-221ENST00000635647 3691 ntTSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 DEF8-202ENST00000418391 852 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AC083949.1-202ENST00000458490 552 ntTSL 3 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 RNF41-210ENST00000552244 716 ntTSL 3 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 CHMP4BP1-201ENST00000556017 588 ntBASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 DUX4L47-201ENST00000566374 394 ntBASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 HCG18-245ENST00000602550 559 ntTSL 4 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ENPP7P14-201ENST00000621765 1040 ntBASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 RBM47-203ENST00000381795 4473 ntAPPRIS P3 TSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AC018442.1-201ENST00000421439 2061 ntBASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 MYLK-203ENST00000359169 7585 ntAPPRIS P3 TSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
FNDC3AQ9Y2H6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 LINC00552-201ENST00000625151 2579 ntBASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 AC079178.1-201ENST00000420915 656 ntBASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 HNRNPA1P63-201ENST00000427917 963 ntBASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 MIR3619-201ENST00000579667 83 ntBASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC15.03■□□□□ -0
FNDC3AQ9Y2H6 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 48.5 ms