Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 CITED2-204ENST00000618718 901 ntTSL 2 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 AL691432.3-201ENST00000621860 400 ntBASIC13.1□□□□□ -0.31
SSR3Q9UNL2 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 SLC44A1-202ENST00000374723 9640 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 LPCAT2-201ENST00000262134 5391 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 AC093525.8-201ENST00000624099 1342 ntBASIC13.1□□□□□ -0.31
SSR3Q9UNL2 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 GRIA4-201ENST00000282499 5508 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.1□□□□□ -0.31
SSR3Q9UNL2 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SALL4P5-201ENST00000419001 1760 ntBASIC13.09□□□□□ -0.31
SSR3Q9UNL2 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TNS1-207ENST00000430930 5900 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 MNT-201ENST00000174618 4996 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 THSD7A-205ENST00000617773 10583 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 AC004870.1-201ENST00000315132 882 ntBASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 YBX2P1-201ENST00000394192 760 ntBASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SUN1-204ENST00000403868 978 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 LBH-204ENST00000406087 559 ntTSL 4 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 AGFG1-204ENST00000409315 2912 ntTSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 CES1P1-201ENST00000421606 1704 ntBASIC13.09□□□□□ -0.31
SSR3Q9UNL2 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 AL590644.1-201ENST00000412427 4676 ntTSL 4 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TP73-203ENST00000357733 4899 ntTSL 5 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 USP49-201ENST00000373006 3177 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TGM2-201ENST00000361475 5070 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 SLC1A1-201ENST00000262352 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
SSR3Q9UNL2 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SSR3Q9UNL2 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
SSR3Q9UNL2 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSR3Q9UNL2 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.08□□□□□ -0.32
SSR3Q9UNL2 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.32
SSR3Q9UNL2 AC073957.3-201ENST00000609998 6758 ntBASIC13.08□□□□□ -0.32
SSR3Q9UNL2 ASAP3-202ENST00000437606 2865 ntAPPRIS ALT2 TSL 2 BASIC13.08□□□□□ -0.32
SSR3Q9UNL2 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
SSR3Q9UNL2 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.08□□□□□ -0.32
SSR3Q9UNL2 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms