Protein–RNA interactions for Protein: Q9NPB8

GPCPD1, Glycerophosphocholine phosphodiesterase GPCPD1, humanhuman

Predictions only

Length 672 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1Q9NPB8 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.91■□□□□ 0.3
GPCPD1Q9NPB8 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 HAP1-204ENST00000393939 5683 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 APOBEC3H-201ENST00000348946 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 FAM177A1-202ENST00000382406 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 OR2R1P-201ENST00000441404 914 ntBASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 CCNC-217ENST00000523985 958 ntTSL 2 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 GATD1-205ENST00000524550 995 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 RHOQP1-201ENST00000555758 579 ntBASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 FGFR3P5-201ENST00000564496 886 ntBASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
GPCPD1Q9NPB8 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPCPD1Q9NPB8 MAPK14-204ENST00000468133 1376 ntTSL 2 BASIC16.89■□□□□ 0.3
GPCPD1Q9NPB8 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
GPCPD1Q9NPB8 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPCPD1Q9NPB8 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
GPCPD1Q9NPB8 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 GSTK1-202ENST00000409500 888 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AC073150.1-201ENST00000450406 1084 ntBASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 UPF3AP2-201ENST00000457924 1132 ntBASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AP001547.1-201ENST00000527440 374 ntTSL 3 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 MRPL48-210ENST00000542303 661 ntTSL 3 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 PGAM1P5-201ENST00000548011 764 ntBASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AL161670.2-201ENST00000557650 1227 ntBASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AC105129.2-201ENST00000559536 390 ntBASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 AC113367.3-201ENST00000508316 1912 ntBASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
GPCPD1Q9NPB8 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms