Protein–RNA interactions for Protein: Q9C056

NKX6-2, Homeobox protein Nkx-6.2, humanhuman

Predicted RBP Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-2Q9C056 AF186996.4-201ENST00000467186 377 ntBASIC11.89□□□□□ -0.51
NKX6-2Q9C056 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 PENK-208ENST00000523051 772 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 RMI2-205ENST00000576027 818 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 AC117500.6-201ENST00000624871 588 ntBASIC11.89□□□□□ -0.51
NKX6-2Q9C056 CCDC60-201ENST00000327554 2450 ntAPPRIS P2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 KCNS2-202ENST00000521839 4340 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 CPLX4-202ENST00000587244 1916 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 MAP1S-202ENST00000544059 3399 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SLC44A4-202ENST00000229729 2589 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SEC24B-201ENST00000265175 5083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 PER1-211ENST00000581082 4521 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 GRM2-202ENST00000395052 3151 ntAPPRIS P1 TSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ALDH1L1-202ENST00000393431 2797 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 EPM2A-207ENST00000611340 2786 ntTSL 2 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 BANK1-202ENST00000428908 3044 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ZDHHC11-201ENST00000283441 2604 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ATF6B-209ENST00000375201 2624 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 ATF6B-210ENST00000375203 2620 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
NKX6-2Q9C056 CACNA1C-214ENST00000399634 7590 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 CACNA1C-222ENST00000406454 7590 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 SLC45A2-202ENST00000382102 2723 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 PNPLA8-206ENST00000436062 3462 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AC008620.2-201ENST00000510294 1569 ntBASIC11.88□□□□□ -0.51
NKX6-2Q9C056 NBEA-204ENST00000400445 11119 ntAPPRIS P2 TSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 PPFIA4-210ENST00000599966 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 ARMCX2-202ENST00000330154 2663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 ALDH9A1-201ENST00000354775 2696 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 PCDHB2-201ENST00000194155 4126 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 GNPNAT1-201ENST00000216410 3860 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AAGAB-207ENST00000561452 2251 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 TRAK1-208ENST00000484786 2008 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 STARD8-203ENST00000374599 4841 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AC002056.1-201ENST00000395613 760 ntBASIC11.88□□□□□ -0.51
NKX6-2Q9C056 IGF2-206ENST00000418738 934 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 CRCP-205ENST00000431089 942 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 FXR1-221ENST00000491674 365 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 COQ9-214ENST00000567933 882 ntTSL 3 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 VMP1-201ENST00000262291 2712 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 ELMOD3-206ENST00000409890 2492 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 LINC00442-202ENST00000456737 2063 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 FBLN2-207ENST00000492059 4193 ntAPPRIS P4 TSL 2 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 SP7-201ENST00000303846 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 ZNF148-205ENST00000484491 2952 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 GNPDA1-210ENST00000508177 2980 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 AL607033.1-201ENST00000623900 1599 ntBASIC11.88□□□□□ -0.51
NKX6-2Q9C056 NRXN1-210ENST00000406316 9375 ntAPPRIS P3 TSL 5 BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 KCNK10-202ENST00000319231 2725 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
NKX6-2Q9C056 NUTM2A-AS1-208ENST00000446751 2394 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AGAP12P-201ENST00000585227 2359 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AJAP1-202ENST00000378191 11666 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PTPRVP-205ENST00000641549 5067 ntBASIC11.87□□□□□ -0.51
NKX6-2Q9C056 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 AC239809.3-201ENST00000599640 4266 ntTSL 5 BASIC11.87□□□□□ -0.51
NKX6-2Q9C056 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 132.9 ms