Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 FGFR1-204ENST00000356207 3824 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AC015688.4-201ENST00000580780 1647 ntBASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 ADAMTSL1-208ENST00000380570 931 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 IGHV3-35-201ENST00000390617 366 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 SOCS2P1-201ENST00000417727 557 ntBASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 PACS1-203ENST00000524815 628 ntTSL 4 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AC008115.1-201ENST00000542291 150 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 RN7SL219P-201ENST00000582872 296 ntBASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AL138725.1-201ENST00000407347 1314 ntBASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
FOXP3Q9BZS1 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 GATB-201ENST00000263985 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 ELN-208ENST00000380575 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 AC073548.1-201ENST00000624088 1882 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 USB1-202ENST00000423271 1217 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 NOP2-211ENST00000540228 668 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 PTP4A1P2-201ENST00000546033 454 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 AC103988.2-201ENST00000561804 725 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 AC124283.3-201ENST00000570869 594 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 MAPT-IT1-201ENST00000624111 3016 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 CICP17-201ENST00000418553 2377 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 CICP16-201ENST00000502609 2813 ntBASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC15.14■□□□□ 0.01
FOXP3Q9BZS1 LIPA-202ENST00000336233 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC15.13■□□□□ 0.01
FOXP3Q9BZS1 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms