Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 COX4I1-208ENST00000564903 1481 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
PCDH11YQ9BZA8 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 FUCA1P1-201ENST00000374476 1351 ntBASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 CHRNA1-204ENST00000409323 1585 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 OR4S1-201ENST00000319988 930 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 MRPL49-209ENST00000534078 518 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 PEBP1P2-201ENST00000603980 558 ntBASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 AC013268.4-201ENST00000637413 2228 ntBASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDH11YQ9BZA8 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 AC073347.1-201ENST00000421633 2643 ntBASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 TMEM9-202ENST00000367332 1544 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 SNRPC-201ENST00000244520 842 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 NME4-203ENST00000397722 1232 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 CHCHD2P2-201ENST00000503744 321 ntBASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 VENTXP3-201ENST00000546480 773 ntBASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 AC013553.1-201ENST00000560906 267 ntBASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 MT2A-202ENST00000561491 581 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 USB1-205ENST00000561743 1135 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 THY1-209ENST00000580275 578 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 MIR4265-201ENST00000582152 99 ntBASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 AC091769.1-201ENST00000619576 568 ntBASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 CAB39L-204ENST00000409130 1411 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 DHCR7-202ENST00000407721 2601 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDH11YQ9BZA8 SLC26A11-202ENST00000411502 2872 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 KL-201ENST00000380099 5006 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 OR52M2P-201ENST00000414298 959 ntBASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 RN7SL375P-201ENST00000492442 298 ntBASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 AC012158.2-201ENST00000536546 354 ntBASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 KRT16P3-202ENST00000580113 1012 ntTSL 3 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 KRT16P1-203ENST00000581027 1012 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 HMGB1P24-201ENST00000611897 328 ntBASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 HPX-213ENST00000615166 826 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 CCDC113-206ENST00000616795 891 ntTSL 5 BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PCDH11YQ9BZA8 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC18.58■□□□□ 0.56
PCDH11YQ9BZA8 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 61.5 ms