Protein–RNA interactions for Protein: Q99698

LYST, Lysosomal-trafficking regulator, humanhuman

Predictions only

Length 3,801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSTQ99698 TSHR-206ENST00000554435 1089 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 ANAPC11-214ENST00000578544 403 ntTSL 3 BASIC9.78□□□□□ -0.84
LYSTQ99698 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC9.78□□□□□ -0.84
LYSTQ99698 LINC01012-203ENST00000628762 743 ntTSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC9.78□□□□□ -0.84
LYSTQ99698 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 AC015688.4-201ENST00000580780 1647 ntBASIC9.78□□□□□ -0.84
LYSTQ99698 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 PRMT5-202ENST00000324366 2531 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 IQCF4-202ENST00000422896 745 ntTSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 AC078882.1-201ENST00000436132 416 ntTSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC9.78□□□□□ -0.84
LYSTQ99698 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 SNRPF-205ENST00000553192 552 ntTSL 4 BASIC9.78□□□□□ -0.84
LYSTQ99698 RN7SL556P-201ENST00000582856 298 ntBASIC9.78□□□□□ -0.84
LYSTQ99698 AC091769.1-201ENST00000619576 568 ntBASIC9.78□□□□□ -0.84
LYSTQ99698 GSTT2-202ENST00000621118 1112 ntTSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC9.78□□□□□ -0.84
LYSTQ99698 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 FAM226B-201ENST00000602508 1490 ntBASIC9.78□□□□□ -0.84
LYSTQ99698 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 LPCAT4-209ENST00000617710 1719 ntTSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 AL365181.3-201ENST00000605886 3222 ntBASIC9.78□□□□□ -0.84
LYSTQ99698 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
LYSTQ99698 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 IL1F10-201ENST00000341010 1013 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 SLC25A3-215ENST00000551265 580 ntTSL 4 BASIC9.78□□□□□ -0.84
LYSTQ99698 IFITM2-205ENST00000602569 605 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC9.78□□□□□ -0.84
LYSTQ99698 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
LYSTQ99698 UBA1-201ENST00000335972 3559 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
LYSTQ99698 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC9.77□□□□□ -0.84
LYSTQ99698 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
LYSTQ99698 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC9.77□□□□□ -0.84
LYSTQ99698 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC9.77□□□□□ -0.84
LYSTQ99698 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.84
LYSTQ99698 LINC00265-2P-201ENST00000413372 782 ntBASIC9.77□□□□□ -0.84
LYSTQ99698 AC231533.1-201ENST00000416061 925 ntTSL 3 BASIC9.77□□□□□ -0.84
LYSTQ99698 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC9.77□□□□□ -0.84
LYSTQ99698 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 POLR2LP1-206ENST00000444785 187 ntBASIC9.77□□□□□ -0.84
LYSTQ99698 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC9.77□□□□□ -0.84
LYSTQ99698 HINT1-205ENST00000508488 703 ntTSL 2 BASIC9.77□□□□□ -0.84
LYSTQ99698 AC111149.2-202ENST00000518355 599 ntTSL 4 BASIC9.77□□□□□ -0.84
LYSTQ99698 PAX5-210ENST00000520281 969 ntTSL 1 (best) BASIC9.77□□□□□ -0.84
LYSTQ99698 AL121790.2-202ENST00000556024 363 ntTSL 5 BASIC9.77□□□□□ -0.84
LYSTQ99698 AC005736.3-201ENST00000571169 244 ntTSL 5 BASIC9.77□□□□□ -0.84
LYSTQ99698 KRT8P34-201ENST00000577607 1044 ntBASIC9.77□□□□□ -0.84
LYSTQ99698 AC100786.1-201ENST00000583018 513 ntTSL 3 BASIC9.77□□□□□ -0.84
LYSTQ99698 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.84
LYSTQ99698 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC9.77□□□□□ -0.85
LYSTQ99698 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
LYSTQ99698 CPSF1-213ENST00000620219 4462 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 UBA1-202ENST00000377269 2497 ntTSL 2 BASIC9.77□□□□□ -0.85
LYSTQ99698 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC9.77□□□□□ -0.85
LYSTQ99698 FXYD2-202ENST00000292079 571 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 TTTY18-201ENST00000438677 221 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 AC122694.1-201ENST00000510987 563 ntTSL 4 BASIC9.77□□□□□ -0.85
LYSTQ99698 AC005740.1-201ENST00000515639 522 ntBASIC9.77□□□□□ -0.85
LYSTQ99698 URB1-AS1-201ENST00000534991 831 ntBASIC9.77□□□□□ -0.85
LYSTQ99698 IFNL3P1-201ENST00000595082 501 ntBASIC9.77□□□□□ -0.85
LYSTQ99698 AC007193.3-201ENST00000598616 188 ntTSL 3 BASIC9.77□□□□□ -0.85
LYSTQ99698 AC011483.3-201ENST00000601506 826 ntTSL 3 BASIC9.77□□□□□ -0.85
LYSTQ99698 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC9.77□□□□□ -0.85
LYSTQ99698 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC9.77□□□□□ -0.85
LYSTQ99698 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC9.77□□□□□ -0.85
LYSTQ99698 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
LYSTQ99698 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
LYSTQ99698 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Retrieved 100 of 98,524 protein–RNA pairs in 50.2 ms