Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 PSMG3-203ENST00000404674 774 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 STK16-203ENST00000409516 895 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 PSMB8-AS1-204ENST00000429600 996 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 AC018638.5-201ENST00000450885 754 ntBASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 GRPEL2P1-201ENST00000453145 339 ntBASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 RPS23-207ENST00000511844 530 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 GSTM4-204ENST00000369836 1412 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 DSG1-202ENST00000462981 1857 ntTSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 MSANTD2P1-201ENST00000445341 1368 ntBASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TXNDC9-201ENST00000264255 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 ACTG2-204ENST00000409918 927 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 BFAR-203ENST00000562442 1414 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 COX5A-205ENST00000568517 582 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 BCL2-203ENST00000589955 5011 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 OCEL1-206ENST00000597836 1044 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC005759.1-202ENST00000599416 415 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC140113.1-201ENST00000603467 169 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC010976.2-201ENST00000609697 852 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AL118522.1-201ENST00000611368 560 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 UPK1A-203ENST00000616789 1366 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC006529.1-201ENST00000459978 637 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 PMFBP1-208ENST00000537792 955 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 SNORD3B-1-201ENST00000577988 758 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 RN7SL556P-201ENST00000582856 298 ntBASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 AC003043.1-201ENST00000588260 337 ntTSL 3 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TMEM205-216ENST00000593256 792 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CDK5RAP2Q96SN8 DBET-201ENST00000630918 3363 ntBASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 CETP-201ENST00000200676 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 HYOU1-219ENST00000614711 3057 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 SLC37A3-201ENST00000326232 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 DGKZ-202ENST00000343674 3816 ntAPPRIS P3 TSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CDK5RAP2Q96SN8 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms