Protein–RNA interactions for Protein: Q96KA5

CLPTM1L, Cleft lip and palate transmembrane protein 1-like protein, humanhuman

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1LQ96KA5 SMIM12-206ENST00000521580 3454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLPTM1LQ96KA5 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC14.09□□□□□ -0.15
CLPTM1LQ96KA5 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CLPTM1LQ96KA5 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CLPTM1LQ96KA5 F2-205ENST00000530231 1849 ntTSL 5 BASIC14.08□□□□□ -0.15
CLPTM1LQ96KA5 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.15
CLPTM1LQ96KA5 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 ZNF541-202ENST00000314121 4631 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 IRF2BPL-201ENST00000238647 4157 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 RPL37AP1-201ENST00000412502 279 ntBASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 MED15P5-201ENST00000423150 992 ntBASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 RBPMS2P1-201ENST00000437762 623 ntBASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 AC022145.2-201ENST00000598203 171 ntBASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 FAM187A-201ENST00000331733 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 CCDC103-204ENST00000417826 3397 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 PCDHB19P-202ENST00000625133 2914 ntBASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 INSC-207ENST00000528567 2237 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 ZNF274-210ENST00000610905 2559 ntAPPRIS P4 TSL 5 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 DPP8-204ENST00000358939 2822 ntTSL 2 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 GOLIM4-201ENST00000309027 2100 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 TRIM13-201ENST00000356017 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CLPTM1LQ96KA5 CETN4P-206ENST00000642099 2168 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AGFG1-202ENST00000373671 1669 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 ATG5-202ENST00000360666 2712 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AC073869.1-201ENST00000415574 2762 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AP003969.2-201ENST00000623739 2275 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 INCENP-202ENST00000394818 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 KDM2B-215ENST00000542973 3170 ntTSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AC026434.2-201ENST00000506094 1078 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AC093520.2-201ENST00000561830 333 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 FAM197Y3-203ENST00000618346 717 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AC004461.2-201ENST00000629517 803 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 RAB34-224ENST00000636513 888 ntTSL 5 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 NRDC-202ENST00000354831 3895 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 TRPM1-203ENST00000542188 6004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 AL445250.1-201ENST00000641671 2259 ntBASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 MTMR11-201ENST00000369140 2324 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 TRIT1-202ENST00000372818 2034 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC14.07□□□□□ -0.16
CLPTM1LQ96KA5 GNG12-AS1-201ENST00000413628 2058 ntTSL 2 BASIC14.06□□□□□ -0.16
CLPTM1LQ96KA5 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CLPTM1LQ96KA5 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CLPTM1LQ96KA5 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms