Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 FBXO32-203ENST00000517956 6744 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 MYNN-201ENST00000349841 4999 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 KIAA1614-202ENST00000367588 9654 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S1Q92572 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
AP3S1Q92572 SYNCRIP-201ENST00000355238 6449 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 BRAP-202ENST00000419234 4026 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 TP53INP2-202ENST00000374810 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
AP3S1Q92572 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
AP3S1Q92572 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 AL031284.1-201ENST00000419297 478 ntBASIC12.93□□□□□ -0.34
AP3S1Q92572 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC12.93□□□□□ -0.34
AP3S1Q92572 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S1Q92572 SERBP1P3-201ENST00000459980 809 ntBASIC12.93□□□□□ -0.34
AP3S1Q92572 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC12.93□□□□□ -0.34
AP3S1Q92572 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.93□□□□□ -0.34
AP3S1Q92572 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.93□□□□□ -0.34
AP3S1Q92572 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC12.93□□□□□ -0.34
AP3S1Q92572 AC000095.1-201ENST00000603208 874 ntBASIC12.93□□□□□ -0.34
AP3S1Q92572 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC12.93□□□□□ -0.34
AP3S1Q92572 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC12.93□□□□□ -0.34
AP3S1Q92572 PTH2R-201ENST00000272847 2713 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 LRRC17-201ENST00000249377 2002 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 AL035456.1-201ENST00000456064 1369 ntBASIC12.93□□□□□ -0.34
AP3S1Q92572 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 USP19-206ENST00000417901 4706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 IRAK1BP1-201ENST00000369940 5656 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
AP3S1Q92572 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 GDPD5-215ENST00000533805 2424 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.92□□□□□ -0.34
AP3S1Q92572 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 FUT6-205ENST00000527106 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 LRRFIP2-202ENST00000354379 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 CAP1-203ENST00000372797 3105 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 DMAC1-201ENST00000358227 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
AP3S1Q92572 AC079140.1-201ENST00000508039 487 ntBASIC12.92□□□□□ -0.34
AP3S1Q92572 KRT18P21-201ENST00000515767 1272 ntBASIC12.92□□□□□ -0.34
AP3S1Q92572 IGHV3-22-201ENST00000520721 359 ntBASIC12.92□□□□□ -0.34
AP3S1Q92572 BRSK2-207ENST00000528710 3528 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
AP3S1Q92572 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC12.92□□□□□ -0.34
AP3S1Q92572 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 LINC00628-201ENST00000628516 1289 ntBASIC12.92□□□□□ -0.34
AP3S1Q92572 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 VPS51-217ENST00000639871 243 ntTSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 PPP1R12A-201ENST00000261207 5582 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
AP3S1Q92572 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 LINC00940-201ENST00000418006 2350 ntTSL 2 BASIC12.92□□□□□ -0.34
AP3S1Q92572 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
AP3S1Q92572 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms