Protein–RNA interactions for Protein: Q8NFW1

COL22A1, Collagen alpha-1(XXII) chain, humanhuman

Predicted RBP Predictions only

Length 1,626 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL22A1Q8NFW1 AC011270.2-201ENST00000624293 2550 ntBASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 APOF-201ENST00000398189 1715 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
COL22A1Q8NFW1 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 CCL24-201ENST00000222902 582 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 RIDA-201ENST00000254878 1057 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 SNU13-204ENST00000402458 462 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 MIR1307-201ENST00000408840 149 ntBASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 HNF1A-AS1-201ENST00000433033 612 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AC023051.2-201ENST00000541141 460 ntBASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AC004584.1-201ENST00000572187 549 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 WDR13-202ENST00000376729 5469 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 TPM2-204ENST00000378300 1771 ntTSL 3 BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 AC018442.1-201ENST00000421439 2061 ntBASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
COL22A1Q8NFW1 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 FUNDC1-201ENST00000378045 1196 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 SH3BGR-202ENST00000380631 780 ntTSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 CRYZL1-205ENST00000399442 612 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 SLC12A9-AS1-201ENST00000412754 369 ntTSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 RFNG-202ENST00000429557 994 ntTSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AL355500.1-201ENST00000439421 297 ntTSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 KRT18P15-201ENST00000458108 1291 ntBASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 ZNF850-201ENST00000589390 523 ntTSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AC112220.4-201ENST00000604982 1263 ntBASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 TARM1-202ENST00000616041 1218 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 SFTPA2-205ENST00000640627 195 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 RFPL3-201ENST00000249007 1488 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 CHRNA2-207ENST00000520933 2497 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 CELP-203ENST00000624767 2414 ntTSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AL162151.1-201ENST00000423922 561 ntTSL 4 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 KCNMA1-AS1-201ENST00000426234 863 ntTSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 BX072579.1-201ENST00000449453 344 ntTSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AL512356.1-201ENST00000548203 535 ntTSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AL136040.1-201ENST00000557775 601 ntTSL 3 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 RN7SL134P-201ENST00000579756 303 ntBASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC18.67■□□□□ 0.58
COL22A1Q8NFW1 WNT8A-202ENST00000398754 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 NFATC4-226ENST00000556279 2924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 ARR3-201ENST00000307959 1292 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 SLC35A2-203ENST00000376515 1044 ntTSL 3 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 CRIP1P2-201ENST00000425396 228 ntBASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 RN7SL69P-201ENST00000468423 272 ntBASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 ALDOAP1-201ENST00000491506 1078 ntBASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 DTWD1-205ENST00000558653 1131 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 MAFG-AS1-202ENST00000583492 969 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 MKS1-202ENST00000393119 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 SPAG1-205ENST00000520508 1796 ntTSL 5 BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
COL22A1Q8NFW1 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
COL22A1Q8NFW1 SERHL2-201ENST00000327678 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms