Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 LINC00324-201ENST00000315707 2082 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 AC022497.1-201ENST00000624916 3691 ntBASIC12.72□□□□□ -0.37
BEST4Q8NFU0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 GSE1-202ENST00000393243 7140 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 WASHC2A-209ENST00000611324 4417 ntAPPRIS ALT2 TSL 2 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 RAP2B-201ENST00000323534 8351 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
BEST4Q8NFU0 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 GRAMD1B-216ENST00000638157 3849 ntTSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 COG1-201ENST00000299886 3079 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 TAB2-208ENST00000636456 3092 ntTSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 IGFN1-201ENST00000295591 4439 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 C12orf43-202ENST00000445832 2397 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 XIRP1-203ENST00000421646 2596 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AP1B1-202ENST00000357586 4176 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 IFT88-202ENST00000351808 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 STOM-202ENST00000347359 870 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 RBM3-202ENST00000376755 1130 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 SPDYE7P-202ENST00000420373 878 ntBASIC12.71□□□□□ -0.37
BEST4Q8NFU0 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 FDX1P1-201ENST00000449115 551 ntBASIC12.71□□□□□ -0.37
BEST4Q8NFU0 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AC005829.1-201ENST00000570002 483 ntBASIC12.71□□□□□ -0.37
BEST4Q8NFU0 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 GTPBP4-202ENST00000360803 5075 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CCBE1-201ENST00000398179 5979 ntTSL 5 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.71□□□□□ -0.37
BEST4Q8NFU0 TP73-207ENST00000378290 1831 ntTSL 2 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 TNPO2-218ENST00000592287 2914 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 TUBGCP4-201ENST00000260383 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 NOB1-201ENST00000268802 1734 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC12.71□□□□□ -0.38
BEST4Q8NFU0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 GRAMD4P3-201ENST00000621665 1669 ntBASIC12.7□□□□□ -0.38
BEST4Q8NFU0 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 GOLGA6L17P-202ENST00000614358 1398 ntBASIC12.7□□□□□ -0.38
BEST4Q8NFU0 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 SMYD4-201ENST00000305513 4384 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 GPRC5A-201ENST00000014914 7362 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
BEST4Q8NFU0 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms