Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC112492.5-201ENST00000421897 457 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 RPL7P3-201ENST00000441388 714 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AL035414.1-201ENST00000451327 857 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 CICP12-201ENST00000455801 843 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AP000812.2-201ENST00000538934 718 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ORAOV1-211ENST00000542341 775 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 C2orf69P2-201ENST00000562032 1123 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 PPY2P-201ENST00000582808 702 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC008825.2-201ENST00000603374 718 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 NPIPB11-202ENST00000614927 1216 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AC027601.3-201ENST00000622907 509 ntBASIC13.72□□□□□ -0.21
NUP43Q8NFH3 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 GGACT-201ENST00000376250 2804 ntAPPRIS P1 TSL 3 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ARFGAP1-203ENST00000370283 3281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
NUP43Q8NFH3 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 NXF1-213ENST00000532297 2795 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 MRPL23-204ENST00000397297 613 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AC234783.1-201ENST00000441761 496 ntBASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AL355994.2-201ENST00000447882 704 ntBASIC13.71□□□□□ -0.21
NUP43Q8NFH3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 PFN2-215ENST00000497148 743 ntTSL 4 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AC027237.1-201ENST00000560942 655 ntBASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 AL136301.1-201ENST00000615830 422 ntBASIC13.71□□□□□ -0.21
NUP43Q8NFH3 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 HSPA8P5-201ENST00000456928 2069 ntBASIC13.71□□□□□ -0.21
NUP43Q8NFH3 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
NUP43Q8NFH3 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 AC009093.10-201ENST00000641956 1442 ntBASIC13.71□□□□□ -0.22
NUP43Q8NFH3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 ABCG1-201ENST00000343687 3037 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 RPS6KC1-207ENST00000543470 4227 ntTSL 2 BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 TNIK-202ENST00000341852 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
NUP43Q8NFH3 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
NUP43Q8NFH3 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms