Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 CLUHP6-201ENST00000580789 941 ntBASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 AC008494.3-201ENST00000606615 944 ntBASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 AP005019.2-201ENST00000615104 511 ntBASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 ETV7-201ENST00000339796 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 DDX31-204ENST00000372159 4577 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 TYK2-210ENST00000529370 3176 ntTSL 2 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 AC008894.2-201ENST00000597983 2987 ntTSL 2 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 AC011474.4-201ENST00000623523 2076 ntBASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.2
CLIP4Q8N3C7 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 MKNK1-203ENST00000371945 2618 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 HSPH1-202ENST00000380405 3480 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 B9D1-203ENST00000395615 805 ntTSL 3 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 BCRP1-201ENST00000444246 691 ntBASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 GIMAP3P-201ENST00000495150 836 ntBASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 AC022447.6-201ENST00000515522 438 ntBASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 AL096865.1-201ENST00000606796 927 ntBASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 RNF145-202ENST00000424310 3613 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 IDH3G-212ENST00000619865 1339 ntTSL 5 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 MGLL-201ENST00000265052 4642 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 ANKHD1-203ENST00000360839 8221 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CLIP4Q8N3C7 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 CERS3-202ENST00000394113 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 AGGF1P1-201ENST00000509500 2073 ntBASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 SFRP1-202ENST00000379845 3873 ntTSL 2 BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 TBC1D8B-203ENST00000357242 5717 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 LRRC59-203ENST00000576448 1531 ntBASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 NDUFA2-201ENST00000252102 804 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 ACKR1-201ENST00000368121 1240 ntBASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 AC236430.1-201ENST00000402231 743 ntBASIC13.81□□□□□ -0.2
CLIP4Q8N3C7 AC002472.2-201ENST00000442739 958 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms