Protein–RNA interactions for Protein: Q86UP3

ZFHX4, Zinc finger homeobox protein 4, humanhuman

Predictions only

Length 3,567 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZFHX4Q86UP3 MIR339-201ENST00000362153 94 ntBASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 PDE4DIP-202ENST00000369347 1137 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 ASS1P2-201ENST00000439895 1223 ntBASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 CSAG1-204ENST00000452779 627 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 CES1P2-201ENST00000566467 1242 ntBASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 RN7SL556P-201ENST00000582856 298 ntBASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 AC090386.2-201ENST00000623010 1039 ntBASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 GOSR2-231ENST00000640007 1425 ntTSL 5 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 RPAIN-202ENST00000381208 1394 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 TP73-207ENST00000378290 1831 ntTSL 2 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 AC018814.1-201ENST00000418972 357 ntTSL 3 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 AC108474.1-201ENST00000507776 421 ntTSL 3 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 RORA-AS1-202ENST00000558140 869 ntTSL 2 BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 PPT1-215ENST00000641471 2368 ntBASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 PNLIP-201ENST00000369221 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 CHAT-205ENST00000395562 2528 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
ZFHX4Q86UP3 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 ARL1-202ENST00000536227 1322 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 S100A13-203ENST00000392623 579 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 MIR1249-201ENST00000408671 66 ntBASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 HINT1-208ENST00000513012 583 ntTSL 4 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AL031705.1-201ENST00000566922 682 ntTSL 3 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC116025.1-201ENST00000575404 415 ntTSL 3 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC127002.1-201ENST00000619123 455 ntBASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 LINC00244-201ENST00000625073 613 ntBASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 CTSS-202ENST00000448301 1421 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 ZDHHC8-201ENST00000320602 3072 ntTSL 5 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC139887.2-201ENST00000503571 531 ntTSL 4 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 CYP2T1P-202ENST00000641596 2535 ntBASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 KRTAP4-12-201ENST00000394014 1077 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 CRIP1P2-201ENST00000425396 228 ntBASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 RAI1-AS1-201ENST00000443696 724 ntTSL 5 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC073896.3-201ENST00000546789 437 ntTSL 5 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC006504.5-210ENST00000585827 539 ntTSL 4 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AC103702.1-201ENST00000548801 2630 ntBASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
ZFHX4Q86UP3 AL162727.3-201ENST00000635661 2787 ntBASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 SCAP-215ENST00000545718 2950 ntTSL 5 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 TEX38-201ENST00000334122 866 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 LAMTOR4-202ENST00000441173 730 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 GOLGA2P10-201ENST00000550961 817 ntBASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 AC023825.2-201ENST00000562970 672 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 AC010335.3-201ENST00000623767 531 ntBASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 RPL13AP3-202ENST00000494676 1473 ntBASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 ZNF877P-201ENST00000437614 612 ntBASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 RN7SL375P-201ENST00000492442 298 ntBASIC13.25□□□□□ -0.29
ZFHX4Q86UP3 NPAS3-209ENST00000551008 1002 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms