Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 ARMC5-205ENST00000563544 3549 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 LINC00528-201ENST00000600723 2160 ntBASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 AC139712.1-201ENST00000378256 1875 ntBASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 ZCCHC17-207ENST00000616859 1458 ntTSL 4 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 ZCCHC17-208ENST00000618216 1489 ntTSL 3 BASIC13.55□□□□□ -0.24
H3F3CQ6NXT2 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 TMBIM7P-202ENST00000641474 1516 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC005840.4-201ENST00000541242 2494 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 CYP4F23P-201ENST00000593402 1579 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC018442.1-201ENST00000421439 2061 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AMT-204ENST00000427987 1646 ntTSL 5 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 LINC01118-202ENST00000409912 1023 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AL357558.1-201ENST00000416646 456 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 LINC01006-204ENST00000435354 545 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC106786.1-201ENST00000442777 792 ntTSL 3 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 PCOLCE2-208ENST00000485766 1088 ntTSL 5 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 RCC2P8-201ENST00000502779 1035 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC245884.6-201ENST00000515672 1067 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC105129.2-201ENST00000559536 390 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AP007216.2-201ENST00000562094 299 ntTSL 3 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC133540.1-201ENST00000620845 1019 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 LINC00667-206ENST00000582363 2935 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 TOR2A-202ENST00000373281 2477 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 KRT8P28-201ENST00000433288 1390 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 AC126335.2-201ENST00000623362 4637 ntBASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC13.54□□□□□ -0.24
H3F3CQ6NXT2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 VPS9D1-201ENST00000389386 2748 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 UCKL1-AS1-201ENST00000623569 3602 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 HNRNPA1P41-201ENST00000397777 928 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AL596276.2-201ENST00000447525 331 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 RASA3-IT1-201ENST00000454005 380 ntTSL 3 BASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AC012618.1-201ENST00000461223 412 ntBASIC13.53□□□□□ -0.24
H3F3CQ6NXT2 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC13.53□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms