Protein–RNA interactions for Protein: Q6NT76

HMBOX1, Homeobox-containing protein 1, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1Q6NT76 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RAD18-204ENST00000418463 563 ntTSL 4 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RAD18-205ENST00000421052 582 ntTSL 3 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AC009407.1-201ENST00000568958 598 ntBASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 UBE2F-223ENST00000612130 2135 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AL662799.1-202ENST00000614205 422 ntBASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ACKR3-201ENST00000272928 2203 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 WARS2-201ENST00000235521 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 TNRC18-203ENST00000399537 10572 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 TNRC18-205ENST00000430969 10562 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AC067750.1-201ENST00000608826 6545 ntBASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
HMBOX1Q6NT76 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 TCAF1-205ENST00000479870 5733 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 GTPBP1-201ENST00000216044 5126 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 AL139385.1-201ENST00000611744 3272 ntBASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 PIN1P1-201ENST00000412108 996 ntBASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 AC114501.2-201ENST00000439631 535 ntBASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 APOA1-AS-201ENST00000444200 563 ntTSL 4 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 AC008738.7-201ENST00000609744 511 ntBASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 AC004461.2-201ENST00000629517 803 ntBASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 CCDC88A-201ENST00000263630 9667 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
HMBOX1Q6NT76 ZNF717-204ENST00000478296 3875 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
HMBOX1Q6NT76 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMBOX1Q6NT76 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
HMBOX1Q6NT76 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMBOX1Q6NT76 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
HMBOX1Q6NT76 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms