Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 CD48-203ENST00000613788 1500 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 TNPO2-202ENST00000425528 5122 ntAPPRIS P4 TSL 5 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 TRIM25-201ENST00000316881 5734 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 SHC1P1-201ENST00000425230 1745 ntBASIC17.5■□□□□ 0.39
RNF20Q5VTR2 RNF150-201ENST00000306799 4535 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
RNF20Q5VTR2 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 GDI2-203ENST00000380191 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 FCRLB-201ENST00000336830 1193 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 MPV17-206ENST00000402722 827 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 KRT17P8-201ENST00000540749 863 ntBASIC17.49■□□□□ 0.39
RNF20Q5VTR2 UEVLD-212ENST00000541984 755 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC17.49■□□□□ 0.39
RNF20Q5VTR2 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 SKA2-202ENST00000437036 625 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 NCK2-206ENST00000522586 490 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 RAB43P1-201ENST00000561790 589 ntBASIC17.48■□□□□ 0.39
RNF20Q5VTR2 AC005586.2-201ENST00000563946 837 ntBASIC17.48■□□□□ 0.39
RNF20Q5VTR2 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 AC012615.4-201ENST00000586694 607 ntTSL 4 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 LRP5L-202ENST00000402859 1661 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
RNF20Q5VTR2 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF20Q5VTR2 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF20Q5VTR2 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
RNF20Q5VTR2 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC17.47■□□□□ 0.39
RNF20Q5VTR2 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
RNF20Q5VTR2 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
RNF20Q5VTR2 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms