Protein–RNA interactions for Protein: Q5TC12

ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

Predicted RBP Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1Q5TC12 LINC02084-201ENST00000606069 1096 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AL603764.1-201ENST00000636452 321 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AC105233.6-201ENST00000642093 218 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 POFUT1-202ENST00000375749 5235 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 GRIN1-203ENST00000371550 3940 ntTSL 5 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 MAGI2-218ENST00000630991 2349 ntTSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 LILRP1-201ENST00000444199 1370 ntBASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
ATPAF1Q5TC12 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AP5Z1-201ENST00000348624 2901 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 SLC6A6P1-201ENST00000413933 1850 ntBASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AL355390.1-201ENST00000325811 2328 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 PTPRS-204ENST00000587303 6353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AL158070.2-201ENST00000623713 1621 ntBASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 NT5C3A-213ENST00000610140 1670 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 VCX2-201ENST00000317103 815 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 COPE-202ENST00000349893 948 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 PGGT1BP2-201ENST00000398621 1028 ntBASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 NME2P1-201ENST00000426182 414 ntBASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AC012184.2-203ENST00000443119 2110 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 KSR1-207ENST00000578981 748 ntTSL 4 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 METTL26-214ENST00000614890 801 ntTSL 3 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AC005252.2-201ENST00000624630 1141 ntBASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AL360270.3-201ENST00000609118 1348 ntBASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
ATPAF1Q5TC12 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 MVK-214ENST00000629016 1591 ntTSL 5 BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 CILP2-202ENST00000586018 4234 ntAPPRIS ALT1 TSL 2 BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
ATPAF1Q5TC12 ATRIP-204ENST00000412052 2721 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms