Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 REXO1L6P-201ENST00000603433 1515 ntBASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 MIR663B-201ENST00000408361 115 ntBASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 LAMA4-209ENST00000453937 645 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 CD74-212ENST00000524315 584 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 AC008403.1-201ENST00000595676 443 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 RPL35-206ENST00000629845 340 ntTSL 5 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 ELN-203ENST00000320492 2991 ntAPPRIS ALT2 TSL 2 BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
PTPN20Q4JDL3 MST1P2-201ENST00000457982 2291 ntBASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 CDIP1-205ENST00000563332 2774 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 CYP4F23P-201ENST00000593402 1579 ntBASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AC012441.2-201ENST00000444843 739 ntBASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 AC005695.3-201ENST00000614522 232 ntBASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 CRLS1-201ENST00000378863 3958 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 MPHOSPH10-205ENST00000498451 2068 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 UBE2G2-202ENST00000345496 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
PTPN20Q4JDL3 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.33■□□□□ 0.05
PTPN20Q4JDL3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN20Q4JDL3 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
PTPN20Q4JDL3 AC020915.4-201ENST00000597230 2708 ntTSL 2 BASIC15.33■□□□□ 0.05
PTPN20Q4JDL3 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.05
PTPN20Q4JDL3 ZKSCAN4-201ENST00000377294 2375 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AL022313.4-201ENST00000562756 2046 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AC041040.2-201ENST00000622926 2899 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AC144522.1-201ENST00000625111 1658 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 BTBD6P1-201ENST00000412176 1267 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 FAM58BP-201ENST00000439056 645 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AC006122.1-201ENST00000493323 440 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AL160314.3-201ENST00000556041 767 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 AL033527.4-201ENST00000641026 673 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 TUBB1P2-201ENST00000422712 1306 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 TUBB1P1-201ENST00000503144 1300 ntBASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 CYP20A1-203ENST00000429815 1812 ntTSL 2 BASIC15.33■□□□□ 0.04
PTPN20Q4JDL3 TATDN3-201ENST00000366973 2321 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms