Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.09□□□□□ -0.31
H3F3AP84243 GAS5-209ENST00000430245 723 ntTSL 3 BASIC13.09□□□□□ -0.31
H3F3AP84243 AC012441.2-201ENST00000444843 739 ntBASIC13.09□□□□□ -0.31
H3F3AP84243 KLF2P1-201ENST00000447438 1042 ntBASIC13.09□□□□□ -0.31
H3F3AP84243 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.09□□□□□ -0.31
H3F3AP84243 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.09□□□□□ -0.31
H3F3AP84243 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.09□□□□□ -0.31
H3F3AP84243 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.09□□□□□ -0.31
H3F3AP84243 AC011365.2-201ENST00000520041 810 ntTSL 5 BASIC13.09□□□□□ -0.31
H3F3AP84243 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.09□□□□□ -0.31
H3F3AP84243 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC13.09□□□□□ -0.31
H3F3AP84243 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 AC005324.6-201ENST00000587972 613 ntBASIC13.09□□□□□ -0.31
H3F3AP84243 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
H3F3AP84243 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.09□□□□□ -0.31
H3F3AP84243 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.09□□□□□ -0.31
H3F3AP84243 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 GLG1-203ENST00000447066 3626 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
H3F3AP84243 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
H3F3AP84243 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
H3F3AP84243 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
H3F3AP84243 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.08□□□□□ -0.31
H3F3AP84243 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
H3F3AP84243 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.31
H3F3AP84243 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
H3F3AP84243 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.31
H3F3AP84243 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 PURA-201ENST00000331327 11497 ntAPPRIS P1 BASIC13.08□□□□□ -0.32
H3F3AP84243 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 AC093520.1-201ENST00000567545 1767 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 SRP14-201ENST00000267884 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 SMS-201ENST00000379404 1174 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3AP84243 GTF2A2-204ENST00000396063 970 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 POM121L10P-201ENST00000436994 1285 ntBASIC13.08□□□□□ -0.32
H3F3AP84243 USE1-202ENST00000445667 795 ntAPPRIS ALT1 TSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.08□□□□□ -0.32
H3F3AP84243 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 RIT1-205ENST00000539040 919 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 AC100827.2-201ENST00000563214 1194 ntBASIC13.08□□□□□ -0.32
H3F3AP84243 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC13.08□□□□□ -0.32
H3F3AP84243 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC13.08□□□□□ -0.32
H3F3AP84243 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 GGT1-202ENST00000400380 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 USP28-214ENST00000545540 3431 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 ADK-205ENST00000539909 1866 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.08□□□□□ -0.32
H3F3AP84243 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
H3F3AP84243 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 AC067750.1-201ENST00000608826 6545 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 ST20-AS1-201ENST00000560255 4223 ntBASIC13.07□□□□□ -0.32
H3F3AP84243 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 HARS-202ENST00000415192 1401 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC13.07□□□□□ -0.32
H3F3AP84243 ADGRB2-205ENST00000398547 4857 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.07□□□□□ -0.32
H3F3AP84243 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC13.07□□□□□ -0.32
H3F3AP84243 SORCS1-201ENST00000263054 7272 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
H3F3AP84243 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 38.7 ms