Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 AC067930.6-201ENST00000623257 4947 ntBASIC17.1■□□□□ 0.33
IRX3P78415 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 AC144522.1-201ENST00000625111 1658 ntBASIC17.1■□□□□ 0.33
IRX3P78415 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
IRX3P78415 SIX6-201ENST00000327720 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 KDSR-201ENST00000326575 1024 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 NCR3-202ENST00000376071 541 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX3P78415 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC17.1■□□□□ 0.33
IRX3P78415 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 RPL8P2-201ENST00000430538 502 ntBASIC17.1■□□□□ 0.33
IRX3P78415 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX3P78415 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC17.1■□□□□ 0.33
IRX3P78415 RN7SL67P-201ENST00000492147 296 ntBASIC17.1■□□□□ 0.33
IRX3P78415 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC17.1■□□□□ 0.33
IRX3P78415 GCOM2-201ENST00000509133 1104 ntBASIC17.1■□□□□ 0.33
IRX3P78415 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX3P78415 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 AL109837.1-201ENST00000603272 613 ntBASIC17.1■□□□□ 0.33
IRX3P78415 AC103810.10-201ENST00000606504 343 ntBASIC17.1■□□□□ 0.33
IRX3P78415 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
IRX3P78415 FRMPD2B-201ENST00000431305 1347 ntBASIC17.1■□□□□ 0.33
IRX3P78415 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 OBSL1-202ENST00000373873 3297 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 PRG2-201ENST00000311862 1424 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
IRX3P78415 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
IRX3P78415 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC17.1■□□□□ 0.33
IRX3P78415 BUB1B-PAK6-201ENST00000441369 2767 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
IRX3P78415 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC17.1■□□□□ 0.33
IRX3P78415 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 ROPN1B-202ENST00000504401 2050 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 S100A2-203ENST00000368709 457 ntAPPRIS P1 TSL 3 BASIC17.09■□□□□ 0.33
IRX3P78415 OR2K2-202ENST00000374428 1038 ntBASIC17.09■□□□□ 0.33
IRX3P78415 AC010973.2-201ENST00000485974 1230 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.09■□□□□ 0.33
IRX3P78415 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC17.09■□□□□ 0.33
IRX3P78415 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.09■□□□□ 0.33
IRX3P78415 AC133540.1-201ENST00000620845 1019 ntBASIC17.09■□□□□ 0.33
IRX3P78415 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 CDK3-202ENST00000448471 1570 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC17.09■□□□□ 0.33
IRX3P78415 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
IRX3P78415 PODN-207ENST00000618387 3065 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
IRX3P78415 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
IRX3P78415 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC17.08■□□□□ 0.33
IRX3P78415 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC17.08■□□□□ 0.33
IRX3P78415 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC17.08■□□□□ 0.33
IRX3P78415 FH-201ENST00000366560 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
IRX3P78415 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC17.08■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms