Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
SKP1P63208 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
SKP1P63208 CNTN2-201ENST00000331830 7999 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 NEBL-203ENST00000417816 3008 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
SKP1P63208 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.92□□□□□ -0.18
SKP1P63208 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 AMT-239ENST00000636865 1914 ntTSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC13.92□□□□□ -0.18
SKP1P63208 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 HNRNPA1P63-201ENST00000427917 963 ntBASIC13.92□□□□□ -0.18
SKP1P63208 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.92□□□□□ -0.18
SKP1P63208 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 AL591846.1-201ENST00000451736 433 ntBASIC13.92□□□□□ -0.18
SKP1P63208 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 MYADML-201ENST00000474610 2147 ntBASIC13.92□□□□□ -0.18
SKP1P63208 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC13.92□□□□□ -0.18
SKP1P63208 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.92□□□□□ -0.18
SKP1P63208 RBM8B-201ENST00000555532 525 ntBASIC13.92□□□□□ -0.18
SKP1P63208 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.92□□□□□ -0.18
SKP1P63208 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC13.92□□□□□ -0.18
SKP1P63208 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.92□□□□□ -0.18
SKP1P63208 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 DRG2-220ENST00000583355 891 ntTSL 3 BASIC13.92□□□□□ -0.18
SKP1P63208 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 AL022328.3-201ENST00000607943 679 ntBASIC13.92□□□□□ -0.18
SKP1P63208 PRKN-211ENST00000615065 261 ntTSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 AL096828.3-201ENST00000615354 462 ntBASIC13.92□□□□□ -0.18
SKP1P63208 ARL16-215ENST00000622299 1053 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 MX1-218ENST00000619682 1980 ntTSL 5 BASIC13.92□□□□□ -0.18
SKP1P63208 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
SKP1P63208 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
SKP1P63208 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 AL008718.2-201ENST00000609206 1313 ntBASIC13.91□□□□□ -0.18
SKP1P63208 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 UBC-205ENST00000536769 3745 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
SKP1P63208 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 E2F3P2-201ENST00000447755 1422 ntBASIC13.91□□□□□ -0.18
SKP1P63208 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 AL359915.2-205ENST00000418015 1529 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 ABCC10-204ENST00000372530 5033 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC13.91□□□□□ -0.18
SKP1P63208 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 ZBTB32-202ENST00000392197 2068 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
SKP1P63208 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC13.91□□□□□ -0.18
SKP1P63208 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
SKP1P63208 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms