Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 CLCNKA-201ENST00000331433 2475 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC13.48□□□□□ -0.25
CLDN20P56880 CNN2P10-201ENST00000443067 918 ntBASIC13.48□□□□□ -0.25
CLDN20P56880 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 RN7SL713P-201ENST00000582127 302 ntBASIC13.48□□□□□ -0.25
CLDN20P56880 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC13.48□□□□□ -0.25
CLDN20P56880 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CLDN20P56880 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 KRT8P4-201ENST00000509735 1454 ntBASIC13.48□□□□□ -0.25
CLDN20P56880 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 TMPRSS3-203ENST00000398405 2754 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
CLDN20P56880 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
CLDN20P56880 AC009093.2-202ENST00000620513 2079 ntBASIC13.48□□□□□ -0.25
CLDN20P56880 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 PLA2G3-201ENST00000215885 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 LSS-211ENST00000522411 2523 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 RCOR1-201ENST00000262241 5754 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 RN7SKP230-201ENST00000365642 335 ntBASIC13.47□□□□□ -0.25
CLDN20P56880 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 AL450469.1-201ENST00000418953 461 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 HOMER2P2-201ENST00000451621 847 ntBASIC13.47□□□□□ -0.25
CLDN20P56880 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 RPL13AP20-201ENST00000459725 609 ntBASIC13.47□□□□□ -0.25
CLDN20P56880 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.47□□□□□ -0.25
CLDN20P56880 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC13.47□□□□□ -0.25
CLDN20P56880 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.47□□□□□ -0.25
CLDN20P56880 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13.47□□□□□ -0.25
CLDN20P56880 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 PPY2P-201ENST00000582808 702 ntBASIC13.47□□□□□ -0.25
CLDN20P56880 PPY2P-202ENST00000583761 657 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.47□□□□□ -0.25
CLDN20P56880 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.47□□□□□ -0.25
CLDN20P56880 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 AC138696.2-201ENST00000607376 223 ntBASIC13.47□□□□□ -0.25
CLDN20P56880 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 STK40-204ENST00000373132 3621 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 KLK5-202ENST00000391809 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 AC015802.1-201ENST00000588104 1449 ntBASIC13.47□□□□□ -0.25
CLDN20P56880 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CLDN20P56880 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CLDN20P56880 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CLDN20P56880 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.46□□□□□ -0.25
CLDN20P56880 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CLDN20P56880 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms