Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 PPP4R3B-205ENST00000616288 4310 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDN12P56749 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 NOP58-201ENST00000264279 2046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 AL139400.1-201ENST00000366220 510 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 VDAC1P7-201ENST00000462417 847 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 FAM86LP-201ENST00000478302 853 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC112482.1-201ENST00000492080 688 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.78□□□□□ -0.36
CLDN12P56749 DAD1-205ENST00000543337 501 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC092865.5-201ENST00000545435 363 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 MPI-209ENST00000564003 1195 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 USP31-203ENST00000567975 2142 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 METTL23-205ENST00000588302 925 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 MIR6074-201ENST00000612054 107 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 RAB34-223ENST00000636154 730 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 PLEKHG2-206ENST00000458508 3898 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 MAGEA1-201ENST00000356661 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 UQCC1-204ENST00000374384 2201 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.78□□□□□ -0.36
CLDN12P56749 FAM219A-207ENST00000379089 3624 ntAPPRIS ALT1 TSL 3 BASIC12.78□□□□□ -0.36
CLDN12P56749 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 CLCN6-201ENST00000312413 5631 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 FOS-202ENST00000535987 1402 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 AC003102.2-201ENST00000589195 1469 ntBASIC12.78□□□□□ -0.36
CLDN12P56749 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC12.78□□□□□ -0.36
CLDN12P56749 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
CLDN12P56749 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
CLDN12P56749 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.77□□□□□ -0.36
CLDN12P56749 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 CSPG4P12-202ENST00000559989 7790 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.77□□□□□ -0.36
CLDN12P56749 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 PWWP2A-202ENST00000456329 3991 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
CLDN12P56749 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 KRT17P5-203ENST00000445433 2333 ntTSL 2 BASIC12.77□□□□□ -0.36
CLDN12P56749 PSME4-202ENST00000404125 7099 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
CLDN12P56749 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
CLDN12P56749 AL118506.1-201ENST00000601296 3082 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 ELN-209ENST00000380576 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 AMPD2-219ENST00000528667 3134 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
CLDN12P56749 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 HNRNPA3P1-201ENST00000401429 1139 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 AL139094.1-201ENST00000405549 1188 ntBASIC12.77□□□□□ -0.37
CLDN12P56749 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.77□□□□□ -0.37
CLDN12P56749 AC114501.2-201ENST00000439631 535 ntBASIC12.77□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms