Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHB4P54760 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.49■□□□□ 0.23
EPHB4P54760 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHB4P54760 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 AC018755.3-203ENST00000597710 411 ntTSL 3 BASIC16.49■□□□□ 0.23
EPHB4P54760 AC138894.2-201ENST00000602838 371 ntBASIC16.49■□□□□ 0.23
EPHB4P54760 AL132994.2-201ENST00000603120 687 ntBASIC16.49■□□□□ 0.23
EPHB4P54760 AC051619.9-201ENST00000623237 597 ntBASIC16.49■□□□□ 0.23
EPHB4P54760 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
EPHB4P54760 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
EPHB4P54760 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.48■□□□□ 0.23
EPHB4P54760 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
EPHB4P54760 AC092535.3-201ENST00000504969 468 ntTSL 3 BASIC16.48■□□□□ 0.23
EPHB4P54760 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.48■□□□□ 0.23
EPHB4P54760 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.48■□□□□ 0.23
EPHB4P54760 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC16.48■□□□□ 0.23
EPHB4P54760 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC16.48■□□□□ 0.23
EPHB4P54760 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC16.48■□□□□ 0.23
EPHB4P54760 AL136295.7-201ENST00000619226 1200 ntBASIC16.48■□□□□ 0.23
EPHB4P54760 AC242376.2-201ENST00000619355 883 ntBASIC16.48■□□□□ 0.23
EPHB4P54760 AC127024.7-201ENST00000625101 200 ntBASIC16.48■□□□□ 0.23
EPHB4P54760 NAP1L6-202ENST00000641404 1222 ntBASIC16.48■□□□□ 0.23
EPHB4P54760 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
EPHB4P54760 MBD1-203ENST00000339998 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
EPHB4P54760 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.48■□□□□ 0.23
EPHB4P54760 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
EPHB4P54760 AC025271.4-201ENST00000621477 1726 ntBASIC16.48■□□□□ 0.23
EPHB4P54760 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
EPHB4P54760 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC16.47■□□□□ 0.23
EPHB4P54760 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
EPHB4P54760 UGT3A1-204ENST00000507113 1650 ntTSL 2 BASIC16.47■□□□□ 0.23
EPHB4P54760 E2F3P2-201ENST00000447755 1422 ntBASIC16.47■□□□□ 0.23
EPHB4P54760 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
EPHB4P54760 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
EPHB4P54760 SERPINE3-201ENST00000400389 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 MIR1227-201ENST00000408484 88 ntBASIC16.47■□□□□ 0.23
EPHB4P54760 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 VDAC1P1-201ENST00000439229 848 ntBASIC16.47■□□□□ 0.23
EPHB4P54760 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC16.47■□□□□ 0.23
EPHB4P54760 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 MPZL3-203ENST00000525386 973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 AC009779.1-201ENST00000551138 283 ntBASIC16.47■□□□□ 0.23
EPHB4P54760 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
EPHB4P54760 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC16.47■□□□□ 0.23
EPHB4P54760 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms