Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.67□□□□□ -0.22
EFNA3P52797 AP001505.2-201ENST00000616815 443 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 AC133540.1-201ENST00000620845 1019 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 AC092299.1-201ENST00000632679 757 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC13.67□□□□□ -0.22
EFNA3P52797 AC138627.1-207ENST00000641560 1006 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNA3P52797 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC13.67□□□□□ -0.22
EFNA3P52797 CCNA1-204ENST00000630422 1751 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
EFNA3P52797 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC13.67□□□□□ -0.22
EFNA3P52797 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
EFNA3P52797 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
EFNA3P52797 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
EFNA3P52797 AC018629.1-201ENST00000623381 1736 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 HIPK3-203ENST00000456517 7399 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
EFNA3P52797 LINC00552-201ENST00000625151 2579 ntBASIC13.67□□□□□ -0.22
EFNA3P52797 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
EFNA3P52797 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
EFNA3P52797 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 AC113367.3-201ENST00000508316 1912 ntBASIC13.66□□□□□ -0.22
EFNA3P52797 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 UBR2-201ENST00000372899 7857 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 UBR2-202ENST00000372901 7857 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 CAMKK2-201ENST00000324774 5598 ntAPPRIS P4 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 ALG1L-201ENST00000340333 805 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 ALKBH2-201ENST00000343075 1030 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 SLC25A24P2-201ENST00000415059 510 ntBASIC13.66□□□□□ -0.22
EFNA3P52797 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 RN7SL11P-201ENST00000471305 293 ntBASIC13.66□□□□□ -0.22
EFNA3P52797 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 AC024681.1-201ENST00000521917 487 ntBASIC13.66□□□□□ -0.22
EFNA3P52797 AL356756.1-201ENST00000550941 551 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 CDK7-214ENST00000626796 358 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.66□□□□□ -0.22
EFNA3P52797 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 AL136379.1-201ENST00000623471 2642 ntBASIC13.66□□□□□ -0.22
EFNA3P52797 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 MAP4K1-210ENST00000591517 2700 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 RAN-210ENST00000541630 1475 ntTSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
EFNA3P52797 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
EFNA3P52797 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
EFNA3P52797 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
EFNA3P52797 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC13.65□□□□□ -0.22
EFNA3P52797 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
EFNA3P52797 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
EFNA3P52797 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 49.4 ms