Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 ILK-201ENST00000299421 1802 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 FAM131B-202ENST00000409346 4295 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
GTF2A1P52655 SLC3A1-205ENST00000409387 2334 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 UBR7-201ENST00000013070 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 MICAL2-201ENST00000256194 3906 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 ZIK1-202ENST00000536878 4144 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC14.38□□□□□ -0.11
GTF2A1P52655 SLC8B1-213ENST00000552014 3289 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 RPL27A-201ENST00000314138 4916 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC14.38□□□□□ -0.11
GTF2A1P52655 AC012569.1-201ENST00000591191 1524 ntBASIC14.38□□□□□ -0.11
GTF2A1P52655 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 CDH11-201ENST00000268603 6857 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 CASP7-201ENST00000345633 2659 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.38□□□□□ -0.11
GTF2A1P52655 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.38□□□□□ -0.11
GTF2A1P52655 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.38□□□□□ -0.11
GTF2A1P52655 PAM16-208ENST00000573553 722 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.38□□□□□ -0.11
GTF2A1P52655 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC14.38□□□□□ -0.11
GTF2A1P52655 AC008608.2-201ENST00000606089 416 ntBASIC14.38□□□□□ -0.11
GTF2A1P52655 AL358472.4-201ENST00000633140 710 ntBASIC14.38□□□□□ -0.11
GTF2A1P52655 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 AMPD2-203ENST00000358729 2838 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 AL357054.4-201ENST00000606285 2814 ntBASIC14.38□□□□□ -0.11
GTF2A1P52655 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 GPC3-201ENST00000370818 2568 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 ZNF142-205ENST00000449707 5909 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 PPP1R11-204ENST00000376769 1689 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC14.38□□□□□ -0.11
GTF2A1P52655 SLC48A1-201ENST00000442218 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 ROBO1-201ENST00000436010 7501 ntTSL 5 BASIC14.38□□□□□ -0.11
GTF2A1P52655 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.38□□□□□ -0.11
GTF2A1P52655 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
GTF2A1P52655 EGLN3-205ENST00000547327 2849 ntBASIC14.37□□□□□ -0.11
GTF2A1P52655 SLC4A7-203ENST00000425128 7970 ntTSL 5 BASIC14.37□□□□□ -0.11
GTF2A1P52655 TAF5L-204ENST00000366676 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 TMBIM6-227ENST00000552699 2964 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
GTF2A1P52655 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 EIF3C-209ENST00000566501 3128 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
GTF2A1P52655 NECTIN2-201ENST00000252483 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 ACVRL1-206ENST00000550683 4121 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 AC115284.2-201ENST00000624646 2054 ntBASIC14.37□□□□□ -0.11
GTF2A1P52655 NFAT5-209ENST00000567239 6376 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC14.37□□□□□ -0.11
GTF2A1P52655 C1orf216-201ENST00000270815 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GTF2A1P52655 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC14.37□□□□□ -0.11
GTF2A1P52655 SPG11-202ENST00000427534 6935 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC14.37□□□□□ -0.11
GTF2A1P52655 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 AC016730.1-201ENST00000420828 832 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 DUSP5P1-201ENST00000441325 1139 ntBASIC14.37□□□□□ -0.11
GTF2A1P52655 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC14.37□□□□□ -0.11
GTF2A1P52655 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.37□□□□□ -0.11
GTF2A1P52655 GGTLC5P-201ENST00000617623 998 ntBASIC14.37□□□□□ -0.11
GTF2A1P52655 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
GTF2A1P52655 TP53I11-220ENST00000533940 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 SLC1A5-202ENST00000434726 1872 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 THEMIS2-201ENST00000328928 2337 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC14.37□□□□□ -0.11
GTF2A1P52655 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 AGAP12P-201ENST00000585227 2359 ntBASIC14.37□□□□□ -0.11
GTF2A1P52655 CTCFL-204ENST00000422869 2966 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC14.37□□□□□ -0.11
GTF2A1P52655 GMFB-201ENST00000358056 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
GTF2A1P52655 LRPPRC-201ENST00000260665 6335 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 AC010336.1-201ENST00000539278 4739 ntBASIC14.36□□□□□ -0.11
GTF2A1P52655 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC14.36□□□□□ -0.11
GTF2A1P52655 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
GTF2A1P52655 PDXDC2P-NPIPB14P-205ENST00000531894 4184 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 104.2 ms