Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SSR1P43307 CALY-202ENST00000368555 783 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 FO681548.1-201ENST00000455617 1132 ntBASIC15.7■□□□□ 0.1
SSR1P43307 AC093433.1-201ENST00000458048 571 ntBASIC15.7■□□□□ 0.1
SSR1P43307 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 TERF1P3-201ENST00000505638 1227 ntBASIC15.7■□□□□ 0.1
SSR1P43307 CLUHP6-201ENST00000580789 941 ntBASIC15.7■□□□□ 0.1
SSR1P43307 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC15.7■□□□□ 0.1
SSR1P43307 AL033527.5-201ENST00000641382 801 ntBASIC15.7■□□□□ 0.1
SSR1P43307 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 FLNA-201ENST00000344736 7932 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 DSCAML1-203ENST00000527706 6099 ntTSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 PRR12-201ENST00000418929 6955 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SSR1P43307 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SSR1P43307 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC15.7■□□□□ 0.1
SSR1P43307 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 CFAP74-209ENST00000493964 5247 ntAPPRIS P5 TSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 LINC00384-201ENST00000437721 6852 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SSR1P43307 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 BDKRB2-202ENST00000542454 6845 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 MGST3-203ENST00000367885 680 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SSR1P43307 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 TPT1P11-201ENST00000458482 498 ntBASIC15.69■□□□□ 0.1
SSR1P43307 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC15.69■□□□□ 0.1
SSR1P43307 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.69■□□□□ 0.1
SSR1P43307 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC15.69■□□□□ 0.1
SSR1P43307 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 AL136172.1-201ENST00000598590 1394 ntBASIC15.69■□□□□ 0.1
SSR1P43307 LINC00475-202ENST00000416438 2506 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 ALDH8A1-204ENST00000367847 1587 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 ARHGAP20-201ENST00000260283 6189 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC15.69■□□□□ 0.1
SSR1P43307 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SSR1P43307 ABLIM2-213ENST00000514025 2974 ntTSL 2 BASIC15.69■□□□□ 0.1
SSR1P43307 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SSR1P43307 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 IL17RD-208ENST00000640796 2345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SSR1P43307 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.68■□□□□ 0.1
SSR1P43307 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SSR1P43307 ACTBP8-201ENST00000403258 1108 ntBASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms