Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC15.28■□□□□ 0.04
MTHFRP42898 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
MTHFRP42898 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC15.27■□□□□ 0.04
MTHFRP42898 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC15.27■□□□□ 0.04
MTHFRP42898 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC15.27■□□□□ 0.04
MTHFRP42898 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 FAS-202ENST00000352159 1722 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MTHFRP42898 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 HLA-DMA-203ENST00000395305 777 ntBASIC15.27■□□□□ 0.04
MTHFRP42898 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC15.27■□□□□ 0.04
MTHFRP42898 AC234644.1-201ENST00000406065 370 ntBASIC15.27■□□□□ 0.04
MTHFRP42898 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 PPOX-204ENST00000462866 473 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 RN7SL530P-201ENST00000485097 298 ntBASIC15.27■□□□□ 0.04
MTHFRP42898 MRPL22P1-201ENST00000505398 616 ntBASIC15.27■□□□□ 0.04
MTHFRP42898 NSD1-211ENST00000511258 809 ntTSL 3 BASIC15.27■□□□□ 0.04
MTHFRP42898 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 MAFTRR-203ENST00000567993 685 ntTSL 3 BASIC15.27■□□□□ 0.04
MTHFRP42898 AC024361.2-201ENST00000574471 898 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
MTHFRP42898 MIR3180-2-201ENST00000581748 88 ntBASIC15.27■□□□□ 0.04
MTHFRP42898 PDCD5-208ENST00000592786 468 ntTSL 3 BASIC15.27■□□□□ 0.04
MTHFRP42898 AC084781.1-201ENST00000613737 656 ntBASIC15.27■□□□□ 0.04
MTHFRP42898 RPS10-207ENST00000621356 784 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
MTHFRP42898 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
MTHFRP42898 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC15.27■□□□□ 0.04
MTHFRP42898 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MTHFRP42898 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MTHFRP42898 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
MTHFRP42898 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.27■□□□□ 0.03
MTHFRP42898 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 RNF11-201ENST00000242719 3084 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC15.27■□□□□ 0.03
MTHFRP42898 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
MTHFRP42898 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC15.27■□□□□ 0.03
MTHFRP42898 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
MTHFRP42898 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
MTHFRP42898 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 AC023090.2-201ENST00000625182 2110 ntBASIC15.26■□□□□ 0.03
MTHFRP42898 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.26■□□□□ 0.03
MTHFRP42898 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 MEG9-201ENST00000429368 2638 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.26■□□□□ 0.03
MTHFRP42898 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC15.26■□□□□ 0.03
MTHFRP42898 APOPT1-209ENST00000492189 513 ntTSL 3 BASIC15.26■□□□□ 0.03
MTHFRP42898 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC15.26■□□□□ 0.03
MTHFRP42898 C2orf69P1-201ENST00000563532 1093 ntBASIC15.26■□□□□ 0.03
MTHFRP42898 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15.26■□□□□ 0.03
MTHFRP42898 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC15.26■□□□□ 0.03
MTHFRP42898 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
MTHFRP42898 AC138035.3-201ENST00000622706 2791 ntBASIC15.26■□□□□ 0.03
MTHFRP42898 TMBIM7P-202ENST00000641474 1516 ntBASIC15.26■□□□□ 0.03
MTHFRP42898 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 DPP6-205ENST00000427557 2388 ntTSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
MTHFRP42898 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
MTHFRP42898 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms