Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 AC024681.1-201ENST00000521917 487 ntBASIC16.11■□□□□ 0.17
RFC5P40937 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC5P40937 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RFC5P40937 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC16.11■□□□□ 0.17
RFC5P40937 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
RFC5P40937 C17orf50-202ENST00000604830 477 ntTSL 3 BASIC16.11■□□□□ 0.17
RFC5P40937 ALG1L-202ENST00000611639 701 ntAPPRIS ALT2 TSL 3 BASIC16.11■□□□□ 0.17
RFC5P40937 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC16.11■□□□□ 0.17
RFC5P40937 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC16.11■□□□□ 0.17
RFC5P40937 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RFC5P40937 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
RFC5P40937 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC5P40937 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC16.11■□□□□ 0.17
RFC5P40937 AGT-201ENST00000366667 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC5P40937 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC5P40937 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC16.11■□□□□ 0.17
RFC5P40937 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RFC5P40937 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 PAK4-208ENST00000599386 5735 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 SLC51A-201ENST00000296327 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 MTATP6P19-201ENST00000413797 659 ntBASIC16.1■□□□□ 0.17
RFC5P40937 AC006335.1-201ENST00000445200 547 ntBASIC16.1■□□□□ 0.17
RFC5P40937 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC16.1■□□□□ 0.17
RFC5P40937 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 CU633904.3-201ENST00000624042 1029 ntBASIC16.1■□□□□ 0.17
RFC5P40937 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 AL390755.1-201ENST00000623716 2027 ntBASIC16.1■□□□□ 0.17
RFC5P40937 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RFC5P40937 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RFC5P40937 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.1■□□□□ 0.17
RFC5P40937 TRIM29-210ENST00000528870 2217 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC5P40937 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RFC5P40937 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC16.1■□□□□ 0.17
RFC5P40937 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 ABHD4-201ENST00000216327 716 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 AC239868.1-201ENST00000369385 493 ntBASIC16.09■□□□□ 0.17
RFC5P40937 ISCA2P1-201ENST00000425548 448 ntBASIC16.09■□□□□ 0.17
RFC5P40937 AL161932.2-201ENST00000435436 679 ntBASIC16.09■□□□□ 0.17
RFC5P40937 MSRA-203ENST00000441698 788 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 AL133466.1-201ENST00000447582 150 ntBASIC16.09■□□□□ 0.17
RFC5P40937 AC135178.1-201ENST00000458568 537 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC16.09■□□□□ 0.17
RFC5P40937 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 AC010754.1-201ENST00000582300 1061 ntTSL 3 BASIC16.09■□□□□ 0.17
RFC5P40937 MIR3188-201ENST00000583494 85 ntBASIC16.09■□□□□ 0.17
RFC5P40937 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC16.09■□□□□ 0.17
RFC5P40937 DNAJC14-201ENST00000317269 3330 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC16.09■□□□□ 0.17
RFC5P40937 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC16.09■□□□□ 0.17
RFC5P40937 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RFC5P40937 DIABLO-201ENST00000267169 1316 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms