Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MIR943-201ENST00000401286 94 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 PON3-203ENST00000427422 894 ntTSL 3 BASIC16.72■□□□□ 0.27
CLCN1P35523 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC16.72■□□□□ 0.27
CLCN1P35523 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 SDHAP3-202ENST00000515467 728 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 ZNF890P-202ENST00000530367 1156 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 ADAM3B-201ENST00000569937 840 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 AC074044.1-201ENST00000609673 707 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC16.72■□□□□ 0.27
CLCN1P35523 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 SYT1-204ENST00000457153 4592 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 HERC3-203ENST00000407637 2634 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MAMDC4-202ENST00000445819 3895 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 TMEM121B-202ENST00000399875 3961 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
CLCN1P35523 RIN3-212ENST00000620541 3617 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 SGK2-203ENST00000373092 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
CLCN1P35523 TMEM63C-201ENST00000298351 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
CLCN1P35523 CCNE2-205ENST00000520509 3330 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
CLCN1P35523 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLCN1P35523 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
CLCN1P35523 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC16.71■□□□□ 0.27
CLCN1P35523 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 TOMM22P5-201ENST00000416399 439 ntBASIC16.71■□□□□ 0.27
CLCN1P35523 AC015922.1-201ENST00000421102 1152 ntBASIC16.71■□□□□ 0.27
CLCN1P35523 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
CLCN1P35523 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 TEX48-202ENST00000612244 662 ntTSL 3 BASIC16.71■□□□□ 0.27
CLCN1P35523 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC16.71■□□□□ 0.27
CLCN1P35523 RAB34-223ENST00000636154 730 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
CLCN1P35523 IKBKB-218ENST00000520835 2403 ntTSL 2 BASIC16.71■□□□□ 0.27
CLCN1P35523 AC012508.2-201ENST00000567613 1472 ntBASIC16.71■□□□□ 0.27
CLCN1P35523 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.71■□□□□ 0.27
CLCN1P35523 AXIN2-201ENST00000307078 4259 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
CLCN1P35523 PID1-204ENST00000409462 2387 ntTSL 1 (best) BASIC16.71■□□□□ 0.26
CLCN1P35523 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC16.71■□□□□ 0.26
CLCN1P35523 ENOX1-201ENST00000261488 2982 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
CLCN1P35523 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 MAD1L1-201ENST00000265854 2718 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 SRSF1-205ENST00000582730 3117 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN1P35523 PITX2-211ENST00000613094 3240 ntAPPRIS ALT1 TSL 5 BASIC16.7■□□□□ 0.26
CLCN1P35523 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC16.7■□□□□ 0.26
CLCN1P35523 CTCFL-208ENST00000432255 2955 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC16.7■□□□□ 0.26
CLCN1P35523 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
CLCN1P35523 HNRNPA3P1-201ENST00000401429 1139 ntBASIC16.7■□□□□ 0.26
CLCN1P35523 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCN1P35523 HNRNPA3P5-201ENST00000455201 833 ntBASIC16.7■□□□□ 0.26
CLCN1P35523 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC16.7■□□□□ 0.26
CLCN1P35523 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC16.7■□□□□ 0.26
CLCN1P35523 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC16.7■□□□□ 0.26
CLCN1P35523 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms